Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq16775 91.5 1e-13 seq2314 84.2 2e-11 >seq16775 Length=16834 Score = 91.5 bits (100), Expect = 1e-13 Identities = 111/146 (76%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090 ||| |||||||| ||||| | ||||| ||||||||||| | ||||| ||| || || Sbjct 11464 AATTGTCATACGAGAAGGGATGGCATGGGGATTAATAATGATATCTGGTGTTAAACCCTC 11405 Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCG- 115148 | ||| |||||||| || | || ||| ||| |||||||| |||||||||||| || Sbjct 11404 GCATGTAAACGGCATATCTTCTTG-TCGATACTGGATTCCACAGGTTCCTTTTTGACCGT 11346 Query 115149 GTAAACGATGCAAATTTATCACCAAT 115174 || | || ||||| ||||| ||||| Sbjct 11345 GTCGA-GAAGCAAACTTATCTCCAAT 11321 >seq2314 Length=2348 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 |||||||||||||||||||| |||| | |||||||||| ||| || |||| |||| Sbjct 136 CCCAAAATTGTAAATGGTCCACAAATTCTGGATAAATATGTCGGTGAAAGTGAAGCAAAT 77 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACG 19529 | | | ||||||||||| || ||||||||| | ||||| Sbjct 76 ATTAGGAGATTGTTTGCTGATGCCGAAGAAGAAGAGAAACG 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397297489951615