Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_028859.1 Length=42881 Score E Sequences producing significant alignments: (Bits) Value seq18169 93.3 1e-14 >seq18169 Length=2751 Score = 93.3 bits (102), Expect = 1e-14 Identities = 178/262 (68%), Gaps = 3/262 (1%) Strand=Plus/Plus Query 31949 AGAATACCGATTTGAACCAAAAGAGCAAGAACCGGAATTCATCACAGATTTATCGCCATA 32008 |||||| || ||||||||| | | ||||| |||| | ||||| ||| |||| | Sbjct 2437 AGAATATCGCTTTGAACCAGATAAACAAGAGTTCTTATTCGTAACAGAATTAGCGCCTTT 2496 Query 32009 TACTAACGCAGTAATGCAATCATTTTGGGTAGACCCTAGAACAAAAATTATTTACATGAC 32068 || |||||||| ||||| ||||||||| | || | ||| | ||| | || ||||| Sbjct 2497 AACAAACGCAGTTATGCAGTCATTTTGGTTTGATAATCGAAAAGGTATTGTCTATATGAC 2556 Query 32069 ACAAGCGCGTCCAGGCAATCATTACATGTTATCTAGATTGAAGCCTAACGGACAATTTAT 32128 |||||| | ||| || || ||| | | ||||| || ||||| |||| ||| Sbjct 2557 ACAAGC---TAGAGGTAACGGATATATGCTCACAAGATTACGACCAAACGGGCAATATAT 2613 Query 32129 TGATAGACTGCTAGTTAAAAATGGCGGACACGGCACACACAACGCCTATAGATATATCGG 32188 ||||| || |||| ||| || ||||| |||||||| | || | ||||| | Sbjct 2614 AGATAGTTCACTTGTTATTGGTGGTGGTCACGGTACACACAATGGTTACCGTTATATAGA 2673 Query 32189 CAATGAGTTGTGGATTTATTCA 32210 |||| | ||||| |||||| Sbjct 2674 TGATGAACTTTGGATATATTCA 2695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137044325843418