Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_028915.1 Length=43228 Score E Sequences producing significant alignments: (Bits) Value seq18169 95.1 3e-15 >seq18169 Length=2751 Score = 95.1 bits (104), Expect = 3e-15 Identities = 209/313 (67%), Gaps = 3/313 (1%) Strand=Plus/Plus Query 32293 AGAATACCGATTTGAACCAAAAGAGCAAGAACCGGAATTCATCACAGATTTATCGCCATA 32352 |||||| || ||||||||| | | ||||| |||| | ||||| ||| |||| | Sbjct 2437 AGAATATCGCTTTGAACCAGATAAACAAGAGTTCTTATTCGTAACAGAATTAGCGCCTTT 2496 Query 32353 TACTAACGCAGTAATGCAATCATTTTGGGTAGACCCTAGAACAAAAATTATTTACATGAC 32412 || |||||||| ||||| ||||||||| | || | ||| | ||| | || ||||| Sbjct 2497 AACAAACGCAGTTATGCAGTCATTTTGGTTTGATAATCGAAAAGGTATTGTCTATATGAC 2556 Query 32413 ACAAGCGCGTCCAGGCAATCATTACATGTTATCTAGATTGAAGCCTAACGGACAATTTAT 32472 |||||| | ||| || || ||| | | ||||| || ||||| |||| ||| Sbjct 2557 ACAAGC---TAGAGGTAACGGATATATGCTCACAAGATTACGACCAAACGGGCAATATAT 2613 Query 32473 TGATAGACTGCTAGTTAAAAATGGCGGACACGGCACACACAACGCCTATAGATATATCGG 32532 ||||| || |||| ||| || ||||| |||||||| | || | ||||| | Sbjct 2614 AGATAGTTCACTTGTTATTGGTGGTGGTCACGGTACACACAATGGTTACCGTTATATAGA 2673 Query 32533 CAATGAGTTGTGGATTTATTCAGCAGTGTTAGACGCTAACAACAATAACAAGTTTGTACG 32592 |||| | ||||| |||||| | | | | || ||| | |||| || || || Sbjct 2674 TGATGAACTTTGGATATATTCATTTATTAAAAATGGCAATAACCAAAACACATTAGTTCG 2733 Query 32593 TTTCCAATATAGA 32605 ||| |||||||| Sbjct 2734 GTTCAAATATAGA 2746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138154294357940