Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq94046 93.3 4e-14 seq296465 84.2 2e-11 >seq94046 Length=398 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 16457 TCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTC 16516 |||| | ||| ||||||| || ||||| | |||| |||||| ||||| || | || Sbjct 133 TCCTTAGGATCTCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTT 192 Query 16517 TCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAA 16576 || || || || ||||| ||||||||||| | || || | | ||| || || | Sbjct 193 TCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAG 252 Query 16577 AATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATG 16636 || || ||| ||| ||||||||| || ||||| ||| || ||||| || || || | Sbjct 253 AAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAAGGCTAAGACA 312 Query 16637 TGCTTAATGAAATATTTTTCG 16657 || || || |||| ||| ||| Sbjct 313 TGTTTGATAAAATGTTTCTCG 333 >seq296465 Length=573 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 16238 ATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATC 16297 |||||||| ||| |||||||| || ||||| |||||||| || ||||| ||||| Sbjct 140 ATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAGCCCTCGTTTTTTCAACCAAAATATT 199 Query 16298 GCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTC 16356 | |||||| || || || ||||| |||||||| | ||||||||||| | ||||| Sbjct 200 GAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAGCGATAATACGTTC 258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509416540468360