Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq6932 215 4e-51 seq4418 100 2e-16 seq6747 89.7 4e-13 >seq6932 Length=2340 Score = 215 bits (238), Expect = 4e-51 Identities = 438/642 (68%), Gaps = 19/642 (3%) Strand=Plus/Plus Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823 |||||||| ||||| || || || || |||||||||| || ||||||||||| |||||| Sbjct 947 GGGTTAGCACCTTTACCACCAGGGAACTCCCAATCGATATCAACACCATCAAAGAATTTC 1006 Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGT-TTCTTTTTTCAACGTCGTG 97882 || | | | ||| |||||||| |||| ||||| ||| |||| || ||| Sbjct 1007 CATGTTAGAAGAAACTCCTTAACTGACTGCACAAAT-CGTGTTCTCTTAGATTTGTCAAC 1065 Query 97883 CATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATG 97942 | || |||| || || | || ||||| || || || || |||||||| || | | Sbjct 1066 TAAAAAGAAGAAAGGATCGGCGAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTC 1125 Query 97943 TGGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCA 98002 ||| ||| ||| | ||| ||||| ||||| ||||||||||| || |||||||| Sbjct 1126 AGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCA 1185 Query 98003 AGCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTT 98062 | |||| || ||||| |||||||||| || ||||| ||||||||||| | ||||| Sbjct 1186 CGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTT 1245 Query 98063 GAAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTT 98122 ||| || || || || || || || || ||||| |||| ||||| || || ||| Sbjct 1246 GAAGTCCTCACGGCCGCTACAGGACCGCTGCAGTGCTTGGAAACTGCCTTCGATCTCTTT 1305 Query 98123 GAGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAGTGCGA 98182 | | ||| ||||| ||||| || ||||| || || || || || || | ||| || | Sbjct 1306 TAAGCTGTCATTTATGCCATCACCGCCGCAAATTGGAATAAAGCCATAGAGCAAATGAGT 1365 Query 98183 TAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGAC 98242 | ||| || | || | || ||||| || | | || |||||||| || || Sbjct 1366 AAGATTAGGTATAGGTATACGATCCACGGGGAATTTTCTAGGATAGACACCCCATTCTAC 1425 Query 98243 AAAGTACGCAGCGACAATTTTATCC---TCTCTTC-TGCCGGGTTTGTTGTTTTCCAGCC 98298 ||||| || | |||| ||| ||| | | | | | || || || ||||| | Sbjct 1426 GAAGTAGGCGCCTACAACTTT-TCCAGATGTTTGCTTAAATGGCTTATTTTTTTCTCCCA 1484 Query 98299 ATGTGTATTCGAGCGGCGCCAGATGACCGCCGTCGGTGTCTGCGATTTTGACCAACAC-- 98356 |||| ||||| || |||| | ||||| || || || || || | ||| | | Sbjct 1485 ATGTATATTCCAGAGGCGGTAAATGACTTCCATCAGTATCAGCCA---CGACAATTTCGG 1541 Query 98357 -GGGATCGCTTATGGAA---CAGCCGTCCTCATTGCAAAGTT 98394 |||||||| ||||| |||||||| ||||||||||||| Sbjct 1542 TGGGATCGC---TGGAACTGCAGCCGTCTTCATTGCAAAGTT 1580 >seq4418 Length=3433 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| ||| | ||||| |||| |||||||| || || ||| ||| | | Sbjct 861 AATGCAAATTTTCGTGAAAACGCTGACTGGCAAAACTATCACATTGGAAGTAGAAGCTTC 920 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || ||||| ||||||| || |||||||| | ||| ||| || Sbjct 921 TGATACAATAGAAAATGTCAAGGCAAAAATTCAGGACAAAGAAGGCATTCCCCCAGACCA 980 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| ||| | || ||||| || || ||| | |||||| | ||| | | |||||||| Sbjct 981 ACAGAGATTGATTTTTGCCGGTAAGCAACTTGAAGATGGAAGAACATTATCTGATTACAA 1040 Query 25214 TATTCAAAAGGAATCTACTCTTCAC 25238 |||||| || |||||||| |||||| Sbjct 1041 TATTCAGAAAGAATCTACCCTTCAC 1065 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | || ||| |||| ||||| || || || ||| |||| | | Sbjct 405 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTC 464 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | ||| ||||||| || || |||||| | || ||| || Sbjct 465 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 524 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| ||||| || || || |||||||| ||||||||| ||| | | ||||| || Sbjct 525 ACAGAGACTGATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACTCTATCTGATTATAA 584 Query 25214 TATTCAAAAGGAATCTACTCTTCAC 25238 ||||||||| ||||||||| | ||| Sbjct 585 TATTCAAAAAGAATCTACTTTGCAC 609 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | |||||| | || ||||| || ||||| ||| || || | Sbjct 633 AATGCAAATTTTTGTAAAAACACTTACAGGCAAGACTATTACTCTTGAAGTTGAGCCTTC 692 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | ||| ||||||| ||||| || || | ||| ||| || Sbjct 693 TGATACAATTGAAAATGTTAAGGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCA 752 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| || ||||| ||||| || |||||| | |||||| || || | || ||||| Sbjct 753 ACAGAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAA 812 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||||||||||| | ||| | || ||||| | |||| || Sbjct 813 TATTCAAAAGGAATCTACCTTGCACTTAGTACTACGACTGAGAGGTGG 860 >seq6747 Length=1699 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||||||| | ||| ||| |||||||| || || ||||| || |||||| ||||| Sbjct 1228 GACAAAGAAGGTATTCCCCCAGACCAACAAAGGCTCATTTTTGCTGGAAAACAACTGGAA 1169 Query 25188 GATTCCA--AAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 ||| | | ||||| | ||||| || |||||||||||||||||||| || Sbjct 1168 GATGGCCGTACACTAT--CTGATTATAACATTCAAAAGGAATCTACTCTACA 1119 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | |||||| | || || ||||| ||||| ||| ||| || | Sbjct 1093 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACGTTAGAAGTTGAAGCCTCT 1034 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| ||||| || ||||| || | || ||||| Sbjct 1033 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 974 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | ||||||||||| || || |||||||||||| ||| || | ||||||||| Sbjct 973 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCAGATTACAAT 914 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| || || || || |||||| |||| | || | |||||||| Sbjct 913 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGG 867 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | ||||| | || || || |||||||| ||| ||||||| | Sbjct 1549 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 1490 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | || ||||| || ||||| || | || ||||| Sbjct 1489 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCGCCTGATCAG 1430 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | |||||||| || || || ||||||||||| | ||| | |||| ||||| Sbjct 1429 CAGCGTCTTATCTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTACAAC 1370 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 |||||||| ||||||||||||||| |||| || || Sbjct 1369 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 1335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409232126723522