Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq71556 116 3e-21 >seq71556 Length=578 Score = 116 bits (128), Expect = 3e-21 Identities = 160/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 97109 CTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAG 97168 |||||| || | ||| || |||||| || ||||||| ||| ||||| || ||||||| Sbjct 486 CTAAATATGTTATATGAGCAATCATATGTGTCAATAGAGCATAACTAGCTATATTAAAAG 427 Query 97169 GCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCAC 97228 |||| ||||| |||||||| || |||||| || | | |||| ||||| ||||| | Sbjct 426 GCACACCTAGACCCATATCTGCGCTTCTTTGGTACATCAGACAAGAAAGTTTTCCGCTAG 367 Query 97229 ACACATAAAACTG-ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAG 97287 | |||| ||||| || || | ||||| || || | |||||||| | ||| || Sbjct 366 ATACATGGAACTGTGCTAAACA-GTGACACGGAGGAAGTGCCATTTTGCTTAAATCAGAG 308 Query 97288 ACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 |||||| ||||| | |||||||| ||||| |||| || Sbjct 307 GGATTCCATGCACATACTAACATTCTCCTATCACTTGGATT 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345463143417110