Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq167059 87.8 3e-12 seq211979 86.0 1e-11 >seq167059 Length=1085 Score = 87.8 bits (96), Expect = 3e-12 Identities = 155/220 (70%), Gaps = 12/220 (5%) Strand=Plus/Minus Query 135727 GGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGA---TACAAACAAACCA 135783 |||||||| || ||| || |||| | | || |||| ||||| | |||| ||| Sbjct 284 GGTATATGTGACAATCTATTGACATGCACAGTCCGAGCATGGGACTTTTCAAAG---CCA 228 Query 135784 CTCATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAACAT 135843 || | ||||||||||||||||| ||| ||||||| ||||||||||||| || || Sbjct 227 CTTGTGTTCTGTCCTGCAATGAACACTAGAATGTGGGGACATCCTATTACATCTAAGCAA 168 Query 135844 ATAGATACGTTAAAATATATGGG-TTTCATAGAAATAGAATGCATAGaaaaaaaaCTAGC 135902 |||||| |||||| || ||| ||||| ||||| | || || |||||| Sbjct 167 ATAGATGTTTTAAAAGATTGGGGCTTTCA-CGAAAT--TCCTCCTATAAGTAAAACTTTG 111 Query 135903 A--TGTGGAGACGTAGGAAATGGTGCTATGGCAGAAGTTG 135940 | |||||||| ||| |||| |||||||||||||| Sbjct 110 ATGTGTGGAGATACAGGTGTGGGTGGTATGGCAGAAGTTG 71 >seq211979 Length=1174 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 188846 CAAGTAGACGCTCATAATATAGTACCTTGTTGGGAAGCTTCTGATAAAGAAGAATACGGT 188905 || ||||| ||||| ||| | || || ||||||| |||||||||||| | ||||| Sbjct 1060 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 1001 Query 188906 GCACGAACTTTAAGAAAAAAGATATTTGATAAATTATATGAATATATGACAGAATTTCCT 188965 || |||| | ||||| || || | ||| ||| |||||||| | |||||||||||| Sbjct 1000 GCGAGAACAATTAGAAATAAAATCAATTCTAAGTTAGATGAATATCTCACAGAATTTCCT 941 Query 188966 GTTGTTCGTAAACATCCATA 188985 ||| ||||||||| || Sbjct 940 CCAGTTATTAAACATCCTTA 921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919590297080920