Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq296465 123 2e-23 seq94046 100 3e-16 seq98010 82.4 7e-11 >seq296465 Length=573 Score = 123 bits (136), Expect = 2e-23 Identities = 113/141 (80%), Gaps = 4/141 (3%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 ||||||| ||| ||||||||| || ||||| |||||||| ||||||| |||||||| Sbjct 126 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAGCCCTCGTTT 183 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 184 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAA 243 Query 14344 CGCTATTAATCGTTCTCCAAA 14364 || || | ||||||||||| Sbjct 244 AGCGATAATACGTTCTCCAAA 264 >seq94046 Length=398 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 || ||||| ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 148 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 207 Query 14534 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAA 14593 |||||||| || || || ||||| | | ||| |||||| | || | || |||| Sbjct 208 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAG 267 Query 14594 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14653 || |||||||| ||||||||| ||| ||||| || || || | | ||| ||||| | | Sbjct 268 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAAGGCTAAGACATGTTTGATAAAATGT 327 Query 14654 TGCTC 14658 | ||| Sbjct 328 TTCTC 332 >seq98010 Length=2704 Score = 82.4 bits (90), Expect = 7e-11 Identities = 117/163 (72%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 13832 AACTTTATAATATTCAATAAAAACTAAAAATCAACATCTAACGAAAAAACATTATCGTCT 13891 || || |||| || | ||||| ||||| || ||||||| | || ||||| || | Sbjct 2410 AAGTTGATAAAATAAACTAAAATTTAAAATTCTGCATCTAAAGTGAACACATTGTC--CA 2467 Query 13892 TTGTTAGAA--ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAG 13949 | | | | | || || ||| || || ||||| | |||| | || ||||||||||| | Sbjct 2468 TAGGTTGCACCATCACTCCCCACTTCTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTG 2527 Query 13950 TTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATT 13992 |||| ||||||| ||| ||| | ||||||||| |||||||| Sbjct 2528 TTTTGCCTTCCAATGAAATAAGATTCATAAAATCGAATGGATT 2570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480461298825640