Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq6932 223 3e-53 seq6747 87.8 1e-12 >seq6932 Length=2340 Score = 223 bits (246), Expect = 3e-53 Identities = 871/1354 (64%), Gaps = 48/1354 (4%) Strand=Plus/Plus Query 35662 CAAG-CCAATATGCATAGCGTTGAGCAAATCGCCGTTGTCCGCATCGATTTCCCATGCGA 35720 |||| || || | ||| || || || | ||| ||||| || || ||||||||||| || | Sbjct 249 CAAGACCCATGTTCATGGCATTCAGTAGATCACCGTTATCAGCGTCGATTTCCCAAGCAA 308 Query 35721 ATAATCCGCCGAGTCTACGCTGAAGCACGTATTCGCCTTTGGCCAGTACCGATCTTTCGC 35780 | | || || ||| | | ||| |||| || || | | || ||||| | Sbjct 309 AGAGACCACCTAGTTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGATCTAGCAT 368 Query 35781 TGTCATACGATATTAAGTCGCCAGAGGCGCGGTC-GAATACGTACGCAGCCTTGGCCACG 35839 ||||||| | || | ||| |||| | |||| ||| || || | ||| | ||| || Sbjct 369 TGTCATAGGTTACAAGGTCTCCAGTTGAT-GGTCTGAAGACATAAGGAGCTTGGGCGACA 427 Query 35840 TCGTCG------AATGCGTATTCGTAACGCGAAATGTTTTTAGCAATCTGTCTGTAGTCG 35893 | |||| ||| | | | | | | || | || ||||||| ||||| || Sbjct 428 TTGTCGTAATGAAATTCCCACTTGCCTTGAGCAACTTCATTCGCAATCTCCCTGTAATCA 487 Query 35894 ACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCTACGCCACTGAATGGATTG 35953 ||||| |||| || ||| ||||| ||| ||||| || ||| |||| ||| || Sbjct 488 ACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATG 547 Query 35954 TCACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTACATTGCTACGCCCAACACG 36013 | | ||| | || ||||| |||||||| || || ||||| || || || | || Sbjct 548 TTGTCTTCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTACTACA 607 Query 36014 AGtttttttGGATTCACTCGTTGCGCGAGCAAAGCGTCCACGGCCACGTTGGCGGTGTAC 36073 | || || |||||||||| || || | ||| | || | | || | ||||| Sbjct 608 ATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAA 667 Query 36074 GGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTCTGATGACCGAGATCGGTATTA 36133 | ||| || || |||| || | |||||| || || ||||| || ||| ||| Sbjct 668 GTTTCCTTGGGACTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCATTT 727 Query 36134 GACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATTTTATCTAAATACTGTTGTGCT 36193 ||||| ||||| ||||| ||||||||||||| |||||| | ||| | ||| | ||| || Sbjct 728 GACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCC 787 Query 36194 CGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCGCTAATCGCTGTGGTGAGTTCT 36253 | |||| | ||| | ||| || || |||| |||||| || | || | ||| Sbjct 788 TTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTTAATTCG 847 Query 36254 AAAGT---ACGATTCGTTTGTATTTGAACTTGATCGAGCATGGCGCGCAATTCGCCCAAT 36310 | | || |||| || | || || ||||||||| | || ||||| || Sbjct 848 TATTTCTTACCATTC--TTAGCTGAGAGCTC-ATCGAGCATCTCACGTAATTCTTTCATC 904 Query 36311 AAAGCGATATACGTGTTATTGTCGCGTTCCACATCGCCAACG---TTTGGATTGGCGCCT 36367 ||| | ||| | || | || | || | || | || || || ||| Sbjct 905 AAACTTACATA------ACAATCACCATCTTCTGGGCTACCGAGATCAGGGTTAGCACCT 958 Query 36368 TTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAAAATTTCCATGTCAACACA 36427 || || || || || |||||||| ||||| | || || || ||||||||||| | | | Sbjct 959 TTACCACCAGGGAACTCCCAATCGATATCAACACCATCAAAGAATTTCCATGTTAGAAGA 1018 Query 36428 AATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCA---TCGTGCATATGATAG 36484 || || || || | ||||| ||| |||| | | | || | | || Sbjct 1019 AACTCCTTAACTGACTGCACAAA------TCGTGTTCTCTTAGATTTGTCAACTAAAAAG 1072 Query 36485 AAG---GGATCGGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAGATTG-GGATT 36540 ||| ||||||| || ||||| || || || || | || | | || ||| || Sbjct 1073 AAGAAAGGATCGGCGAGCGTCCACCCACCAATAGAGGG-AAGAATCTTCAATTCAGGGCG 1131 Query 36541 GGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTTCCATGCGCT 36600 ||| |||| || ||||||||| ||||| |||||||||||||| |||||||| | Sbjct 1132 GGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCACGAAGA 1191 Query 36601 AACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAACTTTAAAATT 36660 | ||| ||||||||||||| | || ||||| |||||||| || || ||||| || | Sbjct 1192 CAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTC 1251 Query 36661 GTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGATTTTAAACT 36720 || | ||| || || | |||| |||| ||||| || ||| |||||| || Sbjct 1252 CTCACGGCCGCTACAGGACCGCTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCT 1311 Query 36721 GTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTGCGAAAGGTT 36780 ||| ||||| || |||||||||||||| || ||||| || || | | || | ||| || Sbjct 1312 GTCATTTATGCCATCACCGCCGCAAATTGGAATAAAGCCATAGAGCAAATGAGTAAGATT 1371 Query 36781 CGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTCGACAAAATA 36840 || | || | |||||||| || || | || || |||||||| || || || Sbjct 1372 AGGTATAGGTATACGATCCACGGGGAATTTTCTAGGATAGACACCCCATTCTACGAAGTA 1431 Query 36841 GGCCGCTACGGTGTGATCAG-TGTTGTACGTATACGGTTTATTGTTTTCTTGCCACGTGT 36899 ||| |||| | ||| |||| | | || | || ||||| |||||| | | || | Sbjct 1432 GGCGCCTACAACTTTTCCAGATGTT-TGCTTAAATGGCTTATTTTTTTCTCCCAATGTAT 1490 Query 36900 ATTGTAACGGTTTTAAATGTTTACCATCGGTGTCTGCGATCACGACTTCTACGGTTTGAC 36959 ||| | || |||||| | ||||| || || || |||||| | |||| || Sbjct 1491 ATTCCAGAGGCGGTAAATGACTTCCATCAGTATCAGC---CACGACAATTTCGGTGGGA- 1546 Query 36960 TAGCCGAA----CAGCCGTCGGCATTGCACAGTT 36989 | || | | |||||||| ||||||| |||| Sbjct 1547 TCGCTGGAACTGCAGCCGTCTTCATTGCAAAGTT 1580 >seq6747 Length=1699 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || ||||||||||| | || || ||||| || || | || || ||| | Sbjct 1093 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACGTTAGAAGTTGAAGCCTCT 1034 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||| ||| |||| ||||| | ||||| ||| | || ||| ||| Sbjct 1033 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 974 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | || | ||| || || ||| |||||||| ||| || ||||||| Sbjct 973 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCAGATTACAAT 914 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||||||||| |||| ||||| || || | || |||| |||||| Sbjct 913 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGGT 866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416710732744160