Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq296465 127 2e-24 seq94046 96.9 3e-15 seq98010 82.4 7e-11 >seq296465 Length=573 Score = 127 bits (140), Expect = 2e-24 Identities = 114/141 (81%), Gaps = 4/141 (3%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 ||||||| ||| ||||||||| || ||||| |||||||| ||||||| |||||||| Sbjct 126 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAGCCCTCGTTT 183 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 ||| ||||||||||||| |||||| || || || |||||||||||||| || ||||| Sbjct 184 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAA 243 Query 14012 CGCTATTAATCGTTCTCCAAA 14032 || || | ||||||||||| Sbjct 244 AGCGATAATACGTTCTCCAAA 264 >seq94046 Length=398 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 14115 AAATATTC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14173 ||||||| | |||| |||| | | || ||||| ||||| | ||| ||||| || Sbjct 120 AAATATTTACCTCTCCTTAGGATCTCTTATATATGTGTCAATTAATAAAGAGTACATCTC 179 Query 14174 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTG 14233 || || | ||||||||||| || ||||||||||| ||||| || ||||| | | ||| Sbjct 180 TGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTG 239 Query 14234 TACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14293 || || | || | || |||| || |||||||| ||||||||| ||| ||||| Sbjct 240 AACCTCTTGTGAGAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAA 299 Query 14294 AAATGCCAATATGTTTTTAATAAAGTATTGCTC 14326 || || || | | ||| ||||| | || ||| Sbjct 300 GAAGGCTAAGACATGTTTGATAAAATGTTTCTC 332 >seq98010 Length=2704 Score = 82.4 bits (90), Expect = 7e-11 Identities = 117/163 (72%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 13500 AACTTTATAATATTCAATAAAAACTAAAAATCAACATCTAATGAAAAAACATTATCGTCT 13559 || || |||| || | ||||| ||||| || ||||||| | || ||||| || | Sbjct 2410 AAGTTGATAAAATAAACTAAAATTTAAAATTCTGCATCTAAAGTGAACACATTGTC--CA 2467 Query 13560 TTGTTAGAA--ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAG 13617 | | | | | || || ||| || || ||||| | |||| | || ||||||||||| | Sbjct 2468 TAGGTTGCACCATCACTCCCCACTTCTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTG 2527 Query 13618 TTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATT 13660 |||| ||||||| ||| ||| | ||||||||| |||||||| Sbjct 2528 TTTTGCCTTCCAATGAAATAAGATTCATAAAATCGAATGGATT 2570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477853924578200