Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq296465 125 7e-24 seq94046 104 2e-17 seq98010 82.4 7e-11 >seq296465 Length=573 Score = 125 bits (138), Expect = 7e-24 Identities = 164/225 (73%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739 ||||||| ||| ||||||||| || ||||| |||||||| ||||||| |||||||| Sbjct 126 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAGCCCTCGTTT 183 Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 184 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAA 243 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 || || | ||||||||||| || | ||| | ||||| | | ||||| || Sbjct 244 AGCGATAATACGTTCTCCAAATATGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 303 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | || || |||||| | | || || ||||||||||| || Sbjct 304 TGCCTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTGAACAA 348 >seq94046 Length=398 Score = 104 bits (114), Expect = 2e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 || ||||| ||||| | ||| ||||| || || || | ||||| ||||| || ||| Sbjct 148 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 207 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049 |||||||| || || || ||||| | | ||| ||||| | || | || ||||| Sbjct 208 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAG 267 Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109 || |||||||||||||||||| ||| ||||| || || || | | ||| ||||| | | Sbjct 268 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAAGGCTAAGACATGTTTGATAAAATGT 327 Query 14110 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149 | ||| || || | | | | |||||| || || |||| Sbjct 328 TTCTCGCAATCTTTTAATGTCTCCCAATCTGCCAAGTCCT 367 >seq98010 Length=2704 Score = 82.4 bits (90), Expect = 7e-11 Identities = 117/163 (72%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 13288 AACTTTATAATATTTAATAAAAACTAAAAATCAACATCTAATGAAAAAACATTATCGTCT 13347 || || |||| || | ||||| ||||| || ||||||| | || ||||| || | Sbjct 2410 AAGTTGATAAAATAAACTAAAATTTAAAATTCTGCATCTAAAGTGAACACATTGTC--CA 2467 Query 13348 TTGTTAGAA--ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAG 13405 | | | | | || || ||| || || ||||| | |||| | || ||||| ||||| | Sbjct 2468 TAGGTTGCACCATCACTCCCCACTTCTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTG 2527 Query 13406 TTTTACCTTCCAGTGATATATTTTCCATAAAATCGAATGGATT 13448 |||| ||||||| ||| ||| | |||||||||||||||||| Sbjct 2528 TTTTGCCTTCCAATGAAATAAGATTCATAAAATCGAATGGATT 2570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476719174905720