Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq71556 122 1e-22 seq211799 89.7 8e-13 >seq71556 Length=578 Score = 122 bits (134), Expect = 1e-22 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 70192 CAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAAT 70251 |||||||| |||||||| || || | || |||||||||| | ||||| | |||| Sbjct 266 CAATCCAAGTGATAGGAGAATGTTAGTATGTGCATGGAATCCCTCTGATTTAAGCAAAAT 325 Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTA-CGA-TGGCAAATTGTCA 70309 |||||| || |||||||||||||| || ||| || | ||| | | || ||| | || Sbjct 326 GGCACTTCCTCCGTGTCACTGTTTAGCACAG--TTCCATGTATCTAGCGGAAAACTTTCT 383 Query 70310 TGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGC 70369 || | ||||| || || || || || ||||| || ||||| || ||||| || || || Sbjct 384 TGTCTGATGTACCAAAGAAGCGCAGATATGGGTCTAGGTGTGCCTTTTAATATAGCTAGT 443 Query 70370 TATTCTATGTTGACGCACATGATTGCTCACATTAC 70404 ||| || | ||||| || ||||||||||| || || Sbjct 444 TATGCTCTATTGACACATATGATTGCTCATATAAC 478 >seq211799 Length=311 Score = 89.7 bits (98), Expect = 8e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 50134 CTGGCCCGTAGAGTATATAATCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGA 50193 |||||| || || || ||||| || || || | ||||| ||||| | || ||| | || Sbjct 222 CTGGCCTGTGGAATACATAATGTATACCGCGGCGTTTCCCAGTGCCTTAACGGGATCTGA 163 Query 50194 TTTGACCATATTCGCAGCGTGCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCG 50253 | | |||||| | | || || |||||||| ||||| |||||| | | | ||| Sbjct 162 CCTTGCGATATTCACTGGTTGTTTCGCCTACATAGCCGACGTGTCGTCCACAAACACTCG 103 Query 50254 CACGCTACGAGTGGGCATCTTGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGC 50313 || |||||||| || || || |||| || || ||||||||||||| || || || || Sbjct 102 GACTCTACGAGTCGGTATATTAGATGTTGTGTATTTGAGCACGATGCCCACTGGGGTAGC 43 Query 50314 GATCGGT 50320 || ||| Sbjct 42 TATTGGT 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738164224445480