Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq6747 82.4 5e-11 seq4418 82.4 5e-11 >seq6747 Length=1699 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GT 43952 |||||||| || | | ||||| || || ||| |||||| |||||||| ||||| | Sbjct 866 ACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCTGA 925 Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || || || |||| |||||||| || || ||||| || | || ||||| || | | Sbjct 926 CAAAGTG-CGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTG 984 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | || ||||| ||| ||||| || || | ||| || || | | || | Sbjct 985 GGATGCCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAA 1044 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | |||||||||||| || || | || || ||||| |||||||| Sbjct 1045 CTTCTAACGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1093 >seq4418 Length=3433 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 |||||||||||||||||||| | | | || || |||| ||||| ||||| || || || Sbjct 596 TCTTTTTGAATATTATAATCAGATAGAGTG-CGTCCATCTTCCAACTGTTTGCCGGCGAA 538 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 |||| | || ||||| |||| | |||||| || ||| ||||||| || || | Sbjct 537 AATCAGTCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTTGCCTTAACATT 478 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 | | ||||| | | ||||| || | || || || || || || | ||||| || Sbjct 477 TTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTAC 418 Query 44110 AAATATTTGCAT 44121 ||| |||||||| Sbjct 417 AAAAATTTGCAT 406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353426296801404