Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq920 123 4e-24 seq78039 116 6e-22 >seq920 Length=434 Score = 123 bits (136), Expect = 4e-24 Identities = 190/271 (70%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | || || ||||||||||| || ||||| ||||| || ||| Sbjct 97 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCGATC 156 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || || | || || ||||| ||| | || || || | || || |||| | Sbjct 157 CGTCGTCTCGCCCGCAGGGGCGGCGTCAAACGTATATCCGGCCTGATATACGAGGAGACT 216 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| | |||||| ||| ||| |||| || || || || || ||| Sbjct 217 CGCGGAGTGCTTAAGGTGTTCCTCGAGAACGTGATCCGCGACGCCGTCACGTACACGGAG 276 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| ||||||| |||| || || |||| || || || Sbjct 277 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 336 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 || | | || || || || |||||| || Sbjct 337 CGCACTCTGTACGGCTTCGGCGGTTAATATT 367 >seq78039 Length=694 Score = 116 bits (128), Expect = 6e-22 Identities = 183/262 (70%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || | | | || | || ||||||||||| |||||||| |||||||| Sbjct 543 CGCTAAGCGACACAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 484 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | |||| | ||||| ||||| || || | || || || | || ||||| | Sbjct 483 AAGAAGATTGGCAAGACGTGGCGGAGTTAAACGCATTTCCGGTTTAATTTACGAAGAAAC 424 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||||||||||| || || | | || || ||||| | ||||| || Sbjct 423 GCGCGGAGTTTTGAAGATTTTTCTAGAAAATGTCATTAGAGATGCCGTGACTTATACTGA 364 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| || | |||||| | || || ||||| ||| | ||||| Sbjct 363 ACACGCTAAAAGGAAGACTGTTACAGCAATGGATGTAGTTTACGCATTAAAAAGACAAGG 304 Query 16672 CCGTAAGATTTATGGTTTTGGA 16693 ||| | | | ||||| |||||| Sbjct 303 CCGCACGTTGTATGGATTTGGA 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78789458033439