Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq111536 104 2e-17 seq296465 102 9e-17 >seq111536 Length=3730 Score = 104 bits (114), Expect = 2e-17 Identities = 220/323 (68%), Gaps = 8/323 (2%) Strand=Plus/Plus Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919 || ||||||||| || ||| ||||| ||||| | ||| | || | |||| || || Sbjct 2905 TCTTATGACTCCAGTATTACCGATGTTAGCTGAAGCTTGCAAGTCGGTTGAAATGGCTAT 2964 Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979 | |||| | | |||| |||| ||| ||| ||||||||||||| || || || ||| | Sbjct 2965 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 3024 Query 131980 TCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCA 132039 ||||||||| | |||| | ||| |||||| | |||||||| || | |||| Sbjct 3025 TCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 3084 Query 132040 TAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAAAAAACTTCA 132098 ||| || | |||| | | | | || | || | |||||||| | || | | || | Sbjct 3085 CAAAGTT-AGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGCTGATTTGA 3143 Query 132099 TTTTAGATGCGGAATTAATAATGATAGAT-ACAAAA--TCAAATTCATTTTTACCATTTG 132155 |||| ||||| ||| || | ||| | ||| ||| | ||| || || || |||| Sbjct 3144 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCA---TTGCCTTTTG 3200 Query 132156 GTTCATTAGGTATACATaaaaaa 132178 || |||||||||| || ||| || Sbjct 3201 GTACATTAGGTATTCACAAACAA 3223 >seq296465 Length=573 Score = 102 bits (112), Expect = 9e-17 Identities = 160/220 (73%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 21477 ATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAAC 21536 || |||||| || | || |||| |||||||| || | |||||| || ||||| | Sbjct 106 ATACAAAATTACTAAACATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATC 164 Query 21537 CGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAA 21595 ||||||| | |||| ||||| |||||||||||||| ||||| ||| ||||| || || Sbjct 165 CGGGCATCAGCCCTCGTTTTTTCAACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAAT 223 Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAAT-CGTTCACCGTATGTAG-ATTCTTTATCCA 21653 || |||||||| || ||||| || | |||| ||||| || || | | | |||| | | Sbjct 224 ATTCCCTCAACCGCCGCAAAAGCGA-TAATACGTTCTCCAAATATGGCAGTCTTGCTGC- 281 Query 21654 ATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACA 21693 ||||| | | ||||| | |||||| | |||||||| Sbjct 282 CGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAATACA 321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529822909578520