Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6932 257 1e-63 seq4418 118 9e-22 seq6747 95.1 1e-14 seq201180 84.2 2e-11 >seq6932 Length=2340 Score = 257 bits (284), Expect = 1e-63 Identities = 663/996 (67%), Gaps = 27/996 (3%) Strand=Plus/Minus Query 55813 TGGATAAAATCGTTGCCGCATATTTTGTCGAGTGGGGTGTTTATCATAGAAACTTTCCTG 55872 |||| ||| | || | ||| || || || || |||||||| |||| |||||| || || | Sbjct 1450 TGGA-AAAGTTGTAGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGAAAATTCCCCG 1392 Query 55873 TCACTCGAGTTCCCACTCCTAATCTGTCACACATTCTCTACGGATTCATACCGATATGCG 55932 | ||| | || | |||||||| | || | ||||| || || || || || |||| Sbjct 1391 TGGATCGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCAATTTGCG 1332 Query 55933 GCGGCGACGGCATTAACGACAGTCTCAAGACGATAACCGGTAGTTTTGAAGCGCTTCAGC 55992 |||| || ||||| || ||||| | || ||| || ||||| |||| || |||| Sbjct 1331 GCGGTGATGGCATAAATGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAGC 1272 Query 55993 GATCGTGTTCGGGTCGAGACGACTTCAAAGTGTCGATTCATGACCCGTGGGCTGCGGTCC 56052 | || ||| || || || ||||||||||| || || || || || ||||| || | | Sbjct 1271 GGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTAC 1212 Query 56053 AAAAGCCCCAAAAACAAGTGACCGCATGGAACGAACCATACAAAGGCAACTTTGGACAAT 56112 |||| || |||||| | || | | |||||||| || ||||||||||||||||| |||| Sbjct 1211 AAAAACCACAAAAAGGATTGTCTTCGTGGAACGAGCCCTACAAAGGCAACTTTGGCCAAT 1152 Query 56113 TGATGGCAGCTAAACTGGCGAATCCCCATG--TTAAAG-TGCTGCCTTCGATCGGTGGCT 56169 | ||| || |||| || | || || || ||| | || || || || ||||| | Sbjct 1151 TAATGTCACTAAAACAAGC---CCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGT 1095 Query 56170 GGACTTTATCCGATCC---GTTCTTTTACTTTCACGATGCGGTCAAACGCAAAATTTTTG 56226 |||| | ||||||| ||||||| || || | | || | | | |||| Sbjct 1094 GGACGCTCGCCGATCCTTTCTTCTTTTTAGTTGACAAATC---TAAGAGAACACGATTTG 1038 Query 56227 TCGATTCTGTCGTCGAGTTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGACT 56286 | | || || |||||| | | || |||||||| || |||||||| || ||||| | Sbjct 1037 TGCAGTCAGTTAAGGAGTTTCTTCTAACATGGAAATTCTTTGATGGTGTTGATATCGATT 978 Query 56287 GGGAGTTTCCCGGCGGAAAGGGGGCCAATTCCAACGTCGGCGATGCCGAACGCGATCGCA 56346 ||||||| || || || || || || || | | |||| | ||| ||| | Sbjct 977 GGGAGTTCCCTGGTGGTAAAGGTGCTAACCCTGATCTCGGTAGCCCAGAA---GATGGTG 921 Query 56347 ACACGTACACGATTCTGTTACGAGATTTACGCGAAGCGCTAGACCGA---CTAAGCCTCG 56403 | || | | || | ||| ||||| || ||| || || || ||| | Sbjct 920 ATTGTTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGA-TGAGCTCTCAGCTAAG 862 Query 56404 AAACGAATCGAACATACGAGCTAACCAGCGCCATTAGCGCCGGCGATGACAAAATCACGG 56463 || | | ||| |||||| |||| || |||||| | || || |||||| | Sbjct 861 AATGGTA-AGAA-ATACGAATTAACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAG 804 Query 56464 TCGTCGACTACACAGCCGCTCAAAAATATTTAGATTATAtttttttGATGACATACGATT 56523 | || |||||| |||||||| ||| | ||| ||||||| ||||||| || || | Sbjct 803 TTGTTGACTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACT 744 Query 56524 TTAAAGGCGCTTGGTCGAATAGCGATCTGGGCTATCAGACGACTTTGTACGCGCCTGCGT 56583 | || || || ||||| ||| ||| || |||| || | |||||||||||||| | Sbjct 743 TCAAGGGAGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCAT 684 Query 56584 TTAATCCTAAAGAACACTATACGACCGATTTTGCGGT-TCGTGCTCTGCTTAAACAAAAA 56642 | ||| || ||| || || | || || | || | || || | ||| | Sbjct 683 GGAGTCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACT-TGTTGGCACAGGGA 625 Query 56643 GTCGAGAATAAAAAGATTGTAGTCGGCGTAGCTATGTACGGTCGCGGGTGGACCGGCGTC 56702 || | ||| ||||||||||| || || || ||||| ||||| || ||||| ||||| Sbjct 624 GTGAATCCTAAGAAGATTGTAGTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTT 565 Query 56703 GGTGATTTCGTCGACAAAAACAATCCATTTTCCGGCACGGCCAAGGGACCTGTCAAAGGT 56762 ||||| || ||| |||| ||| || | |||| || | ||||||||||||||| Sbjct 564 CATGATTACGAAGAC---AACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGT 508 Query 56763 ACCTGGGAAGACGGAGTCGTTGATTTTAGAGAAATT 56798 || ||| |||||||||| ||||||| || || ||| Sbjct 507 ACTTGGCAAGACGGAGTGGTTGATTACAGGGAGATT 472 >seq4418 Length=3433 Score = 118 bits (130), Expect = 9e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || ||||| | ||||| ||| | || || | ||||| || || Sbjct 861 AATGCAAATTTTCGTGAAAACGCTGACTGGCAAAACTATCACATTGGAAGTAGAAGCTTC 920 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | ||||| ||| ||| |||||||||||||| || || || || Sbjct 921 TGATACAATAGAAAATGTCAAGGCAAAAATTCAGGACAAAGAAGGCATTCCCCCAGACCA 980 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 ||||||| |||||| | ||| |||||||| ||||||| || ||| | | | ||||| | Sbjct 981 ACAGAGATTGATTTTTGCCGGTAAGCAACTTGAAGATGGAAG-AACATTATCTGATTACA 1039 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 | ||||| ||||||||||| |||| | || | ||| | ||||| || Sbjct 1040 ATATTCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTCAGAGGTGG 1088 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||| ||| | ||||| || | || || | ||||| || || Sbjct 405 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTC 464 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || || ||| ||| ||||| ||||| || ||||| || || Sbjct 465 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 524 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||||||||||| || |||||| || | ||||||| | | | |||||||| Sbjct 525 ACAGAGACTGATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACTCTATCTGATTATAA 584 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||||||||||| | || ||||| Sbjct 585 TATTCAAAAAGAATCTACTTTGCACTTAGT 614 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||||||| | || || || | ||||| | ||||| ||| | Sbjct 633 AATGCAAATTTTTGTAAAAACACTTACAGGCAAGACTATTACTCTTGAAGTTGAGCCTTC 692 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || || ||| ||| || || || || || || || || || Sbjct 693 TGATACAATTGAAAATGTTAAGGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCA 752 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTAT 24167 |||||| || |||| | || || ||||| |||||| ||| | || |||| || || Sbjct 753 ACAGAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTGTCA--GACTAC 810 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || |||||||| |||||||| | || ||||| || || ||||||| ||| Sbjct 811 AATATTCAAAAGGAATCTACCTTGCACTTAGTACTACGACTGAGAGGTGGA 861 >seq6747 Length=1699 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || | || |||||| | || ||| | || || || ||| Sbjct 1322 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCTTAGAGGTAGAA-CCAT 1264 Query 24050 CG-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 || |||| || || | || || |||||| ||||||||||| || || || || | Sbjct 1263 CGGACACTATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACC 1204 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168 |||| || || |||| | || || ||||| ||||||| | | | | ||||||| Sbjct 1203 AACAAAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATA 1144 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||||||||| |||||||| | |||||||| || Sbjct 1143 ACATTCAAAAGGAATCTACTCTACATTTAGTATT 1110 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| |||||||||| | ||||| | ||||| || || Sbjct 1549 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 1490 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || ||| || || |||||||| ||||| || || ||||| Sbjct 1489 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCGCCTGATCAG 1430 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || || |||||| | ||||| | | | | | ||| || ||| Sbjct 1429 CAGCGTCTTATCTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTACAAC 1370 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||||||||||||||| |||| || || || Sbjct 1369 ATTCAAAAAGAATCTACTCTTCACTTGGTATT 1338 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 |||||||||||||| ||||| |||||||| | || |||| || ||||||||| | ||| Sbjct 1684 GACAAAGAAGGCATTCCTCCAGATCAACAACGTCTTATTTTCGCGGGCAAGCAATTAGAA 1625 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| | | | || || ||||| |||||||||||||| | |||||||| | Sbjct 1624 GATGGTCGTACACTTTCTGACTACAACATCCAAAAAGAATCTACTTTGCATTTAGTACTT 1565 Query 24204 AGATTGAGAGGAGG 24217 | || ||||| || Sbjct 1564 CGTTTAAGAGGTGG 1551 >seq201180 Length=367 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 60884 TCTCAAACTCACGACGCTCTGTGGAATAGAGCTCAAGAAGACTTGCGAGAAA-ACGGCAA 60942 ||| |||| ||||| | | ||||| ||||||| | | || | |||| | ||||| Sbjct 275 TCTAAAACACACGATGACTTATGGAACTCAGCTCAAATACAGCTG-GTGAAAGAGGGCAA 217 Query 60943 AATACATCCGTTCATACGCGTATACTGGGCCaaaaaaaTATTGGAATGGACACCGACGCC 61002 || ||| ||| ||||| | |||||| ||| || || ||||||||||| | | |||| Sbjct 216 GATGCATGGTTTCCTACGCATGTACTGGTGCAAGAAGATTTTGGAATGGACCCAGTCGCC 157 Query 61003 CGAAGAGGCACTGAACCGTGCGATCTACCTCAACCAGCGATACGCTGTCGACGGTTGCGA 61062 |||| |||| ||||| ||| || ||| | || | | ||| ||| ||||| | || Sbjct 156 CGAACAGGCTTTGAACTTTGCTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGA 97 Query 61063 TCCCAGCGGTTATGTAGG 61080 ||| | |||||||| || Sbjct 96 TCCTAATGGTTATGTTGG 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428298427921065