Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq6932 208 6e-49 seq54289 154 1e-32 seq6747 111 1e-19 seq47026 95.1 1e-14 >seq6932 Length=2340 Score = 208 bits (230), Expect = 6e-49 Identities = 306/430 (71%), Gaps = 6/430 (1%) Strand=Plus/Minus Query 32249 CATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAACGATGCCCTCAAA 32308 ||| || | || || |||||||| ||||||||||| || || |||| || | | ||| Sbjct 1362 CATTTGCTCTATGGCTTTATTCCAATTTGCGGCGGTGATGGCATAAATGACAGCTTAAAA 1303 Query 32309 ACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGCGCAGACTTTAAG 32368 ||| |||||||| | || ||||| || || || | ||||| | ||||| || Sbjct 1302 GAGATCGAAGGCAGTTTCCAAGCACTGCAGCGGTCCTGTAGCGGCCGTGAGGACTTCAAA 1243 Query 32369 GTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGCGTGTCTGCGTGG 32428 || | || ||||| || ||||| ||| |||||||||| || || || ||||| ||||| Sbjct 1242 GTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCGTGG 1183 Query 32429 AACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTGGCAAACCCTCAC 32488 ||||| |||||||||||||||||||||||||| ||| | || || |||| | Sbjct 1182 AACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAA 1123 Query 32489 ATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCC---CTTTTATTTTATG 32545 | || ||| | || |||||||| ||||||||| | | ||||| ||| | ||| | Sbjct 1122 TTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTCGCCGATCCTTTCTTCTTTTTAGTT 1063 Query 32546 CACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTTTTACAGGTTTGG 32605 || | | || | |||| ||||| | || || || |||||| | | ||| Sbjct 1062 GACAAATC--TAAGAGAACACG-ATTTGTGCAGTCAGTTAAGGAGTTTCTTCTAACATGG 1006 Query 32606 AAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAGGTGCCAACCCG 32665 ||||||||||| || || || || |||||||||||||| || || |||||||| ||||| Sbjct 1005 AAATTCTTTGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGTAAAGGTGCTAACCCT 946 Query 32666 GCGCTCGGTA 32675 | ||||||| Sbjct 945 GATCTCGGTA 936 >seq54289 Length=786 Score = 154 bits (170), Expect = 1e-32 Identities = 181/242 (75%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 109259 TGCGCA-CTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAG 109317 |||||| ||| || || |||||||| | |||| || ||||||| |||| |||||| Sbjct 92 TGCGCAGCTTCAGC-GATTGGCCTCGCAGCATGAAGCAAAAACCCGAGGAACTCGCCGAG 150 Query 109318 GCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGT 109377 || || || | ||||| ||||||||||||||||| || || || || ||||| ||||| Sbjct 151 GCGGGATTCTTCTACACCGGCCAGGGCGATAAAACTAAGTGCTTCTACTGTGATGGCGGG 210 Query 109378 TTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGT 109437 | || ||||||||| ||||| | ||||||| | | ||||||||| ||||| ||||| Sbjct 211 CTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGG 270 Query 109438 TGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCG 109497 ||| | ||||| ||| || ||||| ||||| || || || || | | ||||| || Sbjct 271 TGCGCCTACGTCCAGCTGGTAAAGGGCCGAGAGTACGTACAGAAGGTGATCACGGAGGCG 330 Query 109498 TG 109499 || Sbjct 331 TG 332 >seq6747 Length=1699 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| ||||| || || ||||| |||||||| | ||| ||| || Sbjct 1549 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 1490 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | |||||| ||||| || ||||| ||| |||| ||||||| Sbjct 1489 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCGCCTGATCAG 1430 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||| | || || || ||||| ||||| | | || | |||| || ||| Sbjct 1429 CAGCGTCTTATCTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTACAAC 1370 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||||| |||||| | || |||| ||| | | || || |||| Sbjct 1369 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGAA 1321 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || |||||||| ||||| | ||| || || Sbjct 1093 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACGTTAGAAGTTGAAGCCTCT 1034 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | ||||| ||||| || ||||| ||| |||| ||||||| Sbjct 1033 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 974 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||| | ||| || || ||||| ||||||| || || | ||||| || Sbjct 973 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCAGATTACAAT 914 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| |||||||| || | || |||| | | |||||||||| Sbjct 913 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGG 867 Score = 102 bits (112), Expect = 7e-17 Identities = 153/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| || || || || ||||||||||| ||| | || || ||| Sbjct 1322 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCTTAGAGGTAGAA-CCAT 1264 Query 115345 CG-ACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || ||||| ||| | | || || ||| || || |||||||| | ||| || | Sbjct 1263 CGGACACTATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACC 1204 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||| || |||| ||| || |||||| | ||||||| | || | | ||||||| Sbjct 1203 AACAAAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATA 1144 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||||||||| || |||||| ||||| | || ||| Sbjct 1143 ACATTCAAAAGGAATCTACTCTACATTTAGTATTG 1109 >seq47026 Length=2159 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 109047 CGGATTTTATTATTTGGGTCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAAT 109106 ||| || ||||| |||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 1961 CGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAAT 2020 Query 109107 AATGCGTTGGCTTGAGGGTGACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTG 109166 ||| ||| ||| ||| ||||| || || ||||| |||| | ||||| ||||| Sbjct 2021 TATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAAAGGTGGGCGCCCCAGTG 2080 Query 109167 TCCGTTC 109173 || ||| Sbjct 2081 CCCCTTC 2087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423723918270760