Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq296465 161 1e-34 seq94046 150 2e-31 seq94045 134 2e-26 >seq296465 Length=573 Score = 161 bits (178), Expect = 1e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||||||||| ||||| || || | ||| |||||||| || | |||||||||||||||| Sbjct 146 TCATTGCTGAAAGTTAATCCGGGCATCAGCCCTCGTTTTTTCAACCAAAATATTGAAGCA 205 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 || || || || |||||||| || || || || ||||| || | ||||||||| |||| Sbjct 206 AAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAGCGATAATACGTTCTCCAAAT 265 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 | || | || |||| |||||| | ||| ||||| || || || ||||||||||| ||| Sbjct 266 ATGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAATACATGGT 325 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || || || || || || || | | |||| Sbjct 326 AGAGTCTCAATTGCATTGAACAAGAAATC 354 >seq94046 Length=398 Score = 150 bits (166), Expect = 2e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 ||||| ||| ||||| || ||||| | ||| ||||| || ||||| ||||| ||||| || Sbjct 141 ATCTCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 200 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 |||||| || || ||||| || || ||||| || | || || ||||| || || | ||| Sbjct 201 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTC 260 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 || | || ||||| || |||||||| || || ||||| || || || | ||| || || Sbjct 261 CACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAAGGCTAAGACATGTTTGAT 320 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570 |||||||||||| |||||| | | |||||||| Sbjct 321 AAAATGTTTCTCGCAATCTTTTAATGTCTCCCAATC 356 >seq94045 Length=338 Score = 134 bits (148), Expect = 2e-26 Identities = 109/132 (83%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649 || |||||||| ||||||||||||||||||| |||||||| ||||| | ||||||||| Sbjct 298 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATGTCC 239 Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709 ||||||| ||||| ||||| || ||||| ||||||| ||| | | | ||||| ||| Sbjct 238 GGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCTCTCAACAGAGGCTCAAGT 179 Query 93710 TGTGGGTCAAAC 93721 |||||||||||| Sbjct 178 TGTGGGTCAAAC 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554685402402520