Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq48588 311 7e-80 seq6932 284 1e-71 seq6747 149 5e-31 seq4418 145 6e-30 >seq48588 Length=2845 Score = 311 bits (344), Expect = 7e-80 Identities = 955/1456 (66%), Gaps = 33/1456 (2%) Strand=Plus/Plus Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838 ||||| || ||||| | |||||| | ||||| || || ||||| || |||||||| ||| Sbjct 264 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 323 Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898 ||||| ||||| ||||||||| ||| | ||||||| || | | ||| | ||| Sbjct 324 GTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCATAGTTAGGT 383 Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958 | | | | || || || ||||||||||| || ||||| | || | ||| || ||| Sbjct 384 TTAGCAACATGTATGTTGAAAGATTGACTTTGGTCTATAAACGCTCCTCTATCAGCGGCC 443 Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018 || || | |||||| | || ||||| || |||||||| | ||||| | | | Sbjct 444 ATCTGTATGGACGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTTCT 503 Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078 || || |||| |||||| | || | || ||||| ||||| ||| ||| Sbjct 504 TTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCATA 563 Query 129079 TGTTCGTTGTACAAATTCAGTTTGA-TCAAATC-GTCGGTCAAG-TATTTGTTTATTACT 129135 | ||| | | |||| ||| || ||||||| ||| | ||| | | ||| | ||| Sbjct 564 TCTTCATCCCATAAAT-CAGCCCGAGTCAAATCAGTCAG--AAGATGATGGTTCACTACA 620 Query 129136 TGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGAT 129195 |||| || || | || || | | |||||| || || || || ||||| ||| Sbjct 621 GGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTTCAAAAGAT 680 Query 129196 TCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAG 129255 ||| ||||||| | ||||| || || | || || ||||| || | | || || Sbjct 681 TCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTTGGCATAGGTGCTATCAATAGAGAA 740 Query 129256 TTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGTG 129315 || |||||||| || | | || | || ||| | | ||||| ||| | ||| Sbjct 741 TTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCAAAGGTCTGTA 800 Query 129316 GGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGTAG 129375 || || | | ||||| || || || | ||||| || || ||||| || Sbjct 801 GGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTTCCTTGATAT 860 Query 129376 GAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAA 129435 | || |||| | || ||| ||||| ||||| ||||| ||||| ||| ||||| Sbjct 861 GTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAA 920 Query 129436 ATTGTTTCGGCAAT-TTTGGTGTTCAAC-ACTTTGGCCTGGTCGCTTTCGTACGGCATAC 129493 |||||||| ||| |||| || | || | | | || | || |||||||| || || | Sbjct 921 ATTGTTTCA--AATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGGTATTC 978 Query 129494 GCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTC 129553 || || ||||||| || |||| ||| |||| ||| | |||||| ||||| || | Sbjct 979 TCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGTCGGTGCCTCA 1038 Query 129554 TATTGGATTTTTGTGC--CGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAA 129611 |||| || ||| ||| | ||| ||||| |||| | || || | ||||||||| Sbjct 1039 TATTTGAAGTTTTTGCTTCAGGGACA--GGATAAAAGTTAACATCAATGACTTTGTTTAA 1096 Query 129612 ATTCTTGAC-CACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTACAT 129670 ||| |||| |||||| || || | | |||||| ||| |||||| | ||| | Sbjct 1097 ATT-TTGAGTCACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAAT----CTA--T 1149 Query 129671 CGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTT 129730 | || ||||| | || | || || || | ||||| || || ||| | || Sbjct 1150 TATTTTCAACAAACTTGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTT 1209 Query 129731 TGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCT 129790 | |||| | |||| || | ||| | ||| ||| |||||| ||||| | || | Sbjct 1210 CTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTT 1269 Query 129791 TTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGA 129850 |||||||||| ||| ||||||||||||| || || | ||| || || || || || || | Sbjct 1270 TTTGATTACTCTTCCTGTTGCAAGCATCCTTATATAACATATATGGTGTACCAGTCTCCA 1329 Query 129851 CTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTACAAA---TT 129907 |||| | ||| | ||| | | | | || ||| |||| ||| ||| ||| ||| || Sbjct 1330 CTTGAGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTTGTTTTATAAACCGTT 1389 Query 129908 TGCCACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGT-GTCG 129966 | | || || ||| |||| |||| ||||||||| || | || || || Sbjct 1390 TTTC---TTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCAT-AACAGTCAGCG 1445 Query 129967 AGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTC 130026 || || | ||| | |||||||| | |||||| | ||||| ||| |||| |||| Sbjct 1446 AGGCCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACTCTTTTC 1505 Query 130027 ATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCA 130086 ||||||| ||| |||| ||| | ||| || |||| |||| ||| | | || || | Sbjct 1506 ATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTTGCTCTCATTTCTTCCTTA 1565 Query 130087 CCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAA 130146 || |||| || | || ||||| || | ||||| || ||||| || || | ||| Sbjct 1566 CCTGTGTTCTTCTTTAAATCTAGGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAA 1625 Query 130147 ATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGTGGCGCACGGCATTGTTG 130203 ||||| | ||| || |||||| || ||||| || || | | | | ||||||| Sbjct 1626 ATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTG 1685 Query 130204 TAGACTCGCAACATTG 130219 || |||| |||||||| Sbjct 1686 TACACTCTCAACATTG 1701 >seq6932 Length=2340 Score = 284 bits (314), Expect = 1e-71 Identities = 799/1210 (66%), Gaps = 19/1210 (2%) Strand=Plus/Plus Query 48510 TTGCCAAGGCCAATGTGCATAGCATTCAACAAATCGCCATTGTCAGCGTCGATTTCCCAT 48569 || ||||| || |||| ||| ||||||| | ||| || || ||||||||||||||||| Sbjct 245 TTACCAAGACCCATGTTCATGGCATTCAGTAGATCACCGTTATCAGCGTCGATTTCCCAA 304 Query 48570 GCAAAGAGGCCTCCTAAATTGTTGTCTAGCACGTATTGACCTTTGTCCATAACAGATTGT 48629 |||||||| || |||| ||||| | | ||| |||| ||| || || ||||| ||| Sbjct 305 GCAAAGAGACCACCTAGTTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGATCTA 364 Query 48630 ACACTATCGTAACTGATGAGATCACCACTGTCCGCTTTGGTCACGTACGCTGCTTTAGCG 48689 || | || || | | || || ||| | | | || || || | |||| ||| Sbjct 365 GCATTGTCATAGGTTACAAGGTCTCCAGTTGATGGTCTGAAGACATAAGGAGCTTGGGCG 424 Query 48690 GTGTCGTCATACCTATATTTGTATTCG--TTAAT--ACGCGATTG--AATGTGCCTATAG 48743 | ||| || | ||| | | | || | || ||| ||| | ||| || Sbjct 425 ACATTGTCGTAATGAAATTCCCACTTGCCTTGAGCAACTTCATTCGCAATCTCCCTGTAA 484 Query 48744 TCGACGACACCGTCCTCCCACGTCCCGGTAACGGGGCCGACGGCCACACCGCTAAAGGGG 48803 || || || ||||| | ||| || || | || || || || || | ||||| Sbjct 485 TCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGA 544 Query 48804 TTATCGTCGCTGTAATCGAGGACACCGGTCCATCCGCGACCGTACATTGCCACACCCAAT 48863 | | ||| |||||| | || || ||||| || ||||| ||||| || ||||| | | Sbjct 545 ATGTTGTCTTCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTACT 604 Query 48864 ACAATTTTGTTGGGTCTCACGCGTTGGTCCAAAAGAGCATTC-ACCGCAAAATCCGTAGT 48922 ||||| || || || |||| | || |||| | || ||| || | || || | || Sbjct 605 ACAATCTTCTTAGGATTCACTCCCTGTGCCAACA-AGTATTTTACTCCGAAGTCAGATGT 663 Query 48923 GTAATGTTCGTTTACATTCCATTTCGGAGCATACAATGCCGTCTGGTGACCCAAATCAAC 48982 |||| ||| || | ||||| || || ||||||| || || || || | | | | Sbjct 664 GTAAGTTTCCTTGGGACTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATC 723 Query 48983 ATTCGACCAGGCACCCTTAAAATCGTAGTTCATTAAAAATATTTTATCTAAATAATTTTG 49042 ||| |||||||| ||||| || || || |||| || || || | ||| | ||||||||| Sbjct 724 ATTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTG 783 Query 49043 GGCATCGTTGTATTTAACCACGGCAATTTTGTCGTCGCCTGCGCTAATGGCGCTTGTTAA 49102 || | | ||| | ||| || ||||| || || | |||||| || ||||| Sbjct 784 AGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTTAA 843 Query 49103 TTCAAAATTACGGCCGGT-TTCGCGTTCAAGATCGTCGAGCATTTCGCGTAATTCTTTCA 49161 ||| | || || | || || | || || |||||||| || ||||||||||||| Sbjct 844 TTCGTATTTCTTACCATTCTTAGC-TGAGAGCTCATCGAGCATCTCACGTAATTCTTTCA 902 Query 49162 AGAGAACAACATAAGTGTGTCCGTCGTGTTGCGAATCGCCCAACAACGGATTCGCCCCTT 49221 | | |||||| | || || | | | | || | || || || || |||| Sbjct 903 TCAAACTTACATAACAATCACCATCTTCTGGGCTACCGAG-ATCA--GGGTTAGCACCTT 959 Query 49222 TGCCGCCCGGAAATTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCAAGTTAACAAAA 49281 | || || || || |||||||| || || || || || || |||||||| |||| | || Sbjct 960 TACCACCAGGGAACTCCCAATCGATATCAACACCATCAAAGAATTTCCATGTTAGAAGAA 1019 Query 49282 ATTCGCGCACCGAATCTACAAA-CACGT-CACGTTTATGCGCATCGTGCATAAAGTAAAA 49339 | || || || | ||||| | || | | | || | || | |||| | || Sbjct 1020 ACTCCTTAACTGACTGCACAAATCGTGTTCTCTTAGATTTG--TCAACTAAAAAGAAGAA 1077 Query 49340 TGGATCGGACAACGTCCAACCCCCGATGGATGGCAATACTTTTAAATTG-GGATTTGCTT 49398 ||||||| | |||||| || || || || || || | | || |||| || |||| Sbjct 1078 AGGATCGGCGAGCGTCCACCCACCAATAGAGGG-AAGAATCTTCAATTCAGGGCGGGCTT 1136 Query 49399 TTTTAATTGCCATCAATTGACCGAAATTGCCTTTGTACGGTTCGTTCCAAGCGGACACAC 49458 ||| | || ||| ||||| || || ||||||||||| || |||||||| | |||| | Sbjct 1137 GTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCACGAAGACAATC 1196 Query 49459 CTTTTTGGGGTTTTTGCAGCGCAGCCCACGGATCGTGAATAGACACTTTGAAATCGTCCC 49518 ||||||| |||||||| | || ||||| |||||||| || || |||||||| || || | Sbjct 1197 CTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCAC 1256 Query 49519 GGCCAGCGCAACTTTTTTGTAATGCCTCAAAACTGCCCGTTATCGTTTTCAAACTGTCGT 49578 |||| || || | ||| | |||||||| ||| ||| || ||||| | Sbjct 1257 GGCCGCTACAGGACCGCTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTGTCAT 1316 Query 49579 TAATGCCGTCGCCCCCGCAAATTGGCACGAAACCGTACAGCAGATGCGATAGATTTGGTG 49638 | ||||| || || ||||||||||| | || || || |||| ||| | ||||| ||| Sbjct 1317 TTATGCCATCACCGCCGCAAATTGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTA 1376 Query 49639 CGGGTACGCGATCGGCGGGAAACGATCGACCGTACACACCCCACTCGACAAAGTACGCAG 49698 |||| ||||| |||| || || | || |||||||| || || ||||| || Sbjct 1377 TAGGTATACGATCCACGGGGAATTTTCTAGGATAGACACCCCATTCTACGAAGTAGGCGC 1436 Query 49699 CGACAACTTT 49708 | |||||||| Sbjct 1437 CTACAACTTT 1446 >seq6747 Length=1699 Score = 149 bits (164), Expect = 5e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||||||||| |||| || || || | ||||| ||||||||| || | Sbjct 1549 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 1490 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| |||||||| ||||| || || || ||||| Sbjct 1489 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCGCCTGATCAG 1430 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || || || || || |||||| | ||||| |||||| Sbjct 1429 CAGCGTCTTATCTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTACAAC 1370 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||||||||||| || | || || || ||||| Sbjct 1369 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 1335 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| || | || || ||||| ||||| | || ||||| | || Sbjct 637 ATGCAGATCTTTGTTAAGACACTTACTGGGAAAACTATCACTTTGGAGGTGGAGCCATCC 578 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||| || ||||| |||||||| ||||| || || ||| Sbjct 577 GACACTATCGAAAATGTTAAGGCAAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCAA 518 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || |||||||| |||||| |||||| | || || |||||| Sbjct 517 CAGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTACAAC 458 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||||||||| || | |||||||| | || | ||||| || Sbjct 457 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTCTTCGCGGTGG 411 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||||||||| | || || ||||| | || | ||||| ||| || | Sbjct 1093 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACGTTAGAAGTTGAAGCCTCT 1034 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||| |||||||| ||||| || ||||| ||||| Sbjct 1033 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 974 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || || || || || ||| ||||| | || |||||||| Sbjct 973 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCAGATTACAAT 914 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| |||||| | || || || | || |||| |||||| Sbjct 913 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGGT 866 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || ||||| |||| | ||||||||| | | Sbjct 865 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCATCA 806 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| || || |||||||||||||||||||| || |||||| Sbjct 805 GACACTATTGAAAATGTTAAAGCCAAGATACAAGACAAGGAGGGTATTCCCCCAGATCAA 746 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| || || ||| | |||||| || || |||| || ||||| Sbjct 745 CAACGTCTAATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAAT 686 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| ||||| | || || || || || | | |||||| Sbjct 685 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTCTAAGAGGAGGT 638 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| ||| | || || ||||| |||| | || || ||| | | Sbjct 1321 ATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCTTAGAGGTAGAACCATCG 1262 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||| || |||||||| || |||||||| || || ||| Sbjct 1261 GACACTATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCAA 1202 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || ||||| || ||||| | || ||| ||| || | || ||||| ||| Sbjct 1201 CAAAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATAAC 1142 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| ||||| || |||||||||| ||||| | || || ||| Sbjct 1141 ATTCAAAAGGAATCTACTCTACATTTAGTATTGCGTCTTCGTGGCGGT 1094 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| |||||||| || || ||||| || ||||||||||||||||| || || ||||| Sbjct 1693 AAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAACAACGTCTTATTTTCGCGGGCAAG 1634 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || ||||| ||| || || | || || |||||||| ||||||||||| || | ||| Sbjct 1633 CAATTAGAAGATGGTCGTACACTTTCTGACTACAACATCCAAAAAGAATCTACTTTGCAT 1574 Query 22423 TTAGT 22427 ||||| Sbjct 1573 TTAGT 1569 >seq4418 Length=3433 Score = 145 bits (160), Expect = 6e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || || || || |||| | ||||||||| | | Sbjct 406 ATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTCT 465 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || |||||||||||||||||| |||||||| || || ||| Sbjct 466 GATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 525 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || |||||||||||||| || ||| ||||| | || ||||| || Sbjct 526 CAGAGACTGATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACTCTATCTGATTATAAT 585 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||||||||||| || | || |||||| |||| Sbjct 586 ATTCAAAAAGAATCTACTTTGCACTTAGTTCTGCG 620 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| ||||| | || || || || | ||||||||||| || | | Sbjct 634 ATGCAAATTTTTGTAAAAACACTTACAGGCAAGACTATTACTCTTGAAGTTGAGCCTTCT 693 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || |||||||||||| |||||||| ||||| || || ||| Sbjct 694 GATACAATTGAAAATGTTAAGGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAA 753 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| || ||||| | || ||| ||||| | || || ||||| Sbjct 754 CAGAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAAT 813 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| ||||| ||| | || ||||| | ||| || | || || Sbjct 814 ATTCAAAAGGAATCTACCTTGCACTTAGTACTACGACTGAGAGGTGG 860 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||||||||||||||| | || || ||||| | ||| | ||||||||| | | Sbjct 177 GATGCAAATTTTTGTTAAAACACTGACTGGCAAAACTATTACTTTAGAAGTGGAAGCATC 236 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || | || ||| |||||||||||||| || ||||| || || || Sbjct 237 TGACACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 296 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 |||| | | || || ||||| || || | || ||| ||||| | || || || || Sbjct 297 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACACTGTCAGACTATAA 356 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| || ||||| || | || || || |||| Sbjct 357 TATTCAGAAGGAATCGACTTTGCACTTGGTGCTGCG 392 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| | || || ||||| |||| | ||||| ||| | | Sbjct 862 ATGCAAATTTTCGTGAAAACGCTGACTGGCAAAACTATCACATTGGAAGTAGAAGCTTCT 921 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || |||| ||||||||| ||||| || || ||||| || || ||| Sbjct 922 GATACAATAGAAAATGTCAAGGCAAAAATTCAGGACAAAGAAGGCATTCCCCCAGACCAA 981 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || || | || ||| | || | || |||||||| Sbjct 982 CAGAGATTGATTTTTGCCGGTAAGCAACTTGAAGATGGAAGAACATTATCTGATTACAAT 1041 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| |||||||| ||| Sbjct 1042 ATTCAGAAAGAATCTACC 1059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418129308907495