Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq6747 205 2e-47 seq4418 174 3e-38 seq21542 131 3e-25 seq173230 100 5e-16 >seq6747 Length=1699 Score = 205 bits (226), Expect = 2e-47 Identities = 182/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||||||| || ||||| || || || ||||| ||||||||||| || Sbjct 1095 CCGCCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATGTTATAATCAGAT 1154 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | || || || || || ||||| ||||||||||| || ||| Sbjct 1155 AGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTTTGTTGGTCTGGGGGA 1214 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| ||||||||||| ||| || || ||||| | || |||||| Sbjct 1215 ATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCCGATGGTTCTACC 1274 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||||||||||||||| || || ||||| || || ||||||||| Sbjct 1275 TCTAAGGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 1322 Score = 165 bits (182), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| |||||||| || | ||| || || | || || |||||||||||||| || || | Sbjct 409 TTCCACCGCGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCG 468 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||| || ||||| || || || || ||||| | |||||||| || | Sbjct 469 ACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGG 528 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 ||||||| ||||| ||||| ||||||||||| || ||||| ||||| | || || | Sbjct 529 GAATGCCCTCCTTATCTTGGATCTTTGCCTTAACATTTTCGATAGTGTCGGATGGCTCCA 588 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||| ||||| ||||| || || || ||||| || || |||||||| Sbjct 589 CCTCCAAAGTGATAGTTTTCCCAGTAAGTGTCTTAACAAAGATCTGCAT 637 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || ||||||||||| | ||||||||||| || || || || || ||| Sbjct 639 CCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 698 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | |||||| || || ||| Sbjct 699 AGAGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATTAGACGTTGTTGATCTGGGGGA 758 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| || || || || || ||||||| || ||| ||| Sbjct 759 ATACCCTCCTTGTCTTGTATCTTGGCTTTAACATTTTCAATAGTGTCTGATGGTTCCACT 818 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 819 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 865 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || ||||| |||||||||||||| || || || |||||||| ||||| || |||| Sbjct 1321 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGG 1380 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | || ||||| || ||||| || ||||| || || | || || || || | Sbjct 1381 AAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAGATAAGACGCTGCTGATCAGGCG 1440 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| || |||||||| || || || || || || || || || | | ||| | Sbjct 1441 GGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 1500 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || ||||| ||||| || ||||| || || || |||||||| Sbjct 1501 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1549 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | ||||||||| || ||||||||||| || || || ||||| || Sbjct 867 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCTGAC 926 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| || ||||| || || || || || | || || || ||||| Sbjct 927 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 986 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || |||||||| || || ||||| || || || ||||| | | ||| ||| Sbjct 987 ATGCCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 1046 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || |||||||| || || || || || || || ||||| Sbjct 1047 TCTAACGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1093 Score = 113 bits (124), Expect = 8e-20 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 ||| || || | || || |||||||||||||| || || || ||||| | |||||||| Sbjct 1568 TACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTC 1627 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 ||| ||||| || ||||| || || | |||||| || || ||||||||||| |||||||| Sbjct 1628 TAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTG 1687 Query 68372 AATCTTTGCCTT 68383 || || ||||| Sbjct 1688 GATTTTAGCCTT 1699 >seq4418 Length=3433 Score = 174 bits (192), Expect = 3e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || | ||| |||| |||||||| | || || || || || || ||||| || | Sbjct 406 TTCCACCCCTAAGACGCAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTG 347 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | ||||| | |||||||| | ||||| |||||||| || | |||||||||||| || | Sbjct 346 ACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAG 287 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 ||||||||||||||||||||||||||||||| || ||||| ||||| | || ||| | Sbjct 286 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGATGCTTCCA 227 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || ||||| || || || || || || || || ||||| Sbjct 226 CTTCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 178 Score = 167 bits (184), Expect = 4e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || | || |||| || ||||| | || || |||||||| || |||||||| | Sbjct 634 TTCCACCCCTTAGACGCAGAACTAAGTGCAAAGTAGATTCTTTTTGAATATTATAATCAG 575 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | |||||||| ||||| || |||||||| || ||||| |||||||| || | Sbjct 574 ATAGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAAATCAGTCTCTGTTGGTCTGGAG 515 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||||||||||||||| |||||||| || || || || || | | ||| | Sbjct 514 GAATACCTTCCTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCA 455 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||| ||||| || || || || || ||||| || || || |||||| Sbjct 454 CTTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 405 Score = 154 bits (170), Expect = 3e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || || ||||| || || || ||||| || | ||| || |||||||| | || Sbjct 1065 GTGAAGGGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCTTCCATCTTCAAGTTG 1006 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| ||||| || || | ||| |||||||| || ||||||||||| ||||| ||||| || Sbjct 1005 CTTACCGGCAAAAATCAATCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCCTGAATTTT 946 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 ||||||||| || || || || | | |||||||||||| ||||| ||||| || || Sbjct 945 TGCCTTGACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATAGTTTTGCCAGT 886 Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462 || || || ||||| || |||||| Sbjct 885 CAGCGTTTTCACGAAAATTTGCATT 861 >seq21542 Length=1513 Score = 131 bits (144), Expect = 3e-25 Identities = 193/272 (71%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCG 268270 || || || | ||| |||||||| ||| | ||| ||||| |||||| || || Sbjct 858 CCCGTGGCCACCACGAAGTCCTCGGGCGCGTCCTGCTGTAGCATGAGCCACATGGCCTCC 799 Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGC-- 268328 |||||||| ||||| |||||||| || ||||| ||| | ||| ||||| ||| Sbjct 798 ACATAGTCGCGCGCGTGGCCCCAGTCACGCTTGCTGTCGAGGTTGCCGAGCTCGAGGTGC 739 Query 268329 -ATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAAC 268387 || | ||| || | | || | || || ||||| || || |||||||| Sbjct 738 GATAAGAG---GCCAAGGTGTATCTTGGCGACGCCCCGGGTGATCTTGCGCGTCACGAAG 682 Query 268388 GTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCA 268447 ||||||| || | ||||||||||||||||| || | ||||||||||| |||||||| Sbjct 681 TTCTCGCCGCGGCGCGGGCTCTCGTGGTTGAACAGTAGCCCGTTGCACGCAAACATGCCG 622 Query 268448 TATGCCTCACGGTAGTTCACGACCGTCCAGTA 268479 || ||||| ||||||||||| || ||||||| Sbjct 621 TACGCCTCGCGGTAGTTCACCACTATCCAGTA 590 >seq173230 Length=587 Score = 100 bits (110), Expect = 5e-16 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 ||||||||||||||||||||||| || || || || || || ||||| | | ||| Sbjct 1 GGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCA 60 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTAT 68469 |||||||| || |||||||| || ||||| || || ||||| ||||||||| || ||| Sbjct 61 ACTTCCAAAGTAATGGTTTTACCAGTGAGTGTTTTCACGAAAATCTGCATTTTGATAT 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918022047533560