Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq48588 114 2e-20 >seq48588 Length=2845 Score = 114 bits (126), Expect = 2e-20 Identities = 459/719 (64%), Gaps = 24/719 (3%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||| | || |||| ||||| | ||| |||| || | ||||| || || ||| Sbjct 651 TAAATATTTGATGTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 710 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTC 114060 || || ||||| ||||| || | || || || | ||| | ||| ||| | ||| Sbjct 711 GCAGTTGGCATAGGTGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTA-TCTTTTC 769 Query 114061 CTTGAGGGCGTCCCAGT--CGTAGTT------GAGCTTTGTCTCCCCCTGCCACATATCA 114112 |||||| | |||||| | || | ||| |||||| |||||||||| Sbjct 770 TTTGAGGACAGCCCAGTTCCAAAGGTCTGTAGGAGTTTTGTC--------CCACATATCA 821 Query 114113 AACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACC 114172 ||||||||||||||||| ||||| ||| | | |||| ||||| ||| || Sbjct 822 TACTGGAGGATACCTTGGCTAGCTGGACTTCCTTGATATGTGCTGTATGCGCCTTCTTTT 881 Query 114173 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 114232 || || ||||| | || || || | || | | ||| ||||| ||||| || | | Sbjct 882 TCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGA 941 Query 114233 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 114292 || | | || | || || | | | || ||| | |||| ||| || Sbjct 942 TTAAGGAGTATTGCTTTCTCACTTTCGTAAGGTATTCTCATCAACACAAATGTATCTGCC 1001 Query 114293 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 114352 | ||| || ||||| | || || || || || |||||||| || || || Sbjct 1002 ATACCCTGAACACCAATACCGATAGGTCGGTGCCTCATATTTGAAGTTTTTGCTTCAGGG 1061 Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412 || |||||||| || ||| || || | |||| ||||| || |||| |||||||||| Sbjct 1062 ACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAATCTTTGTGATT 1121 Query 114413 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 114472 || | | |||| ||| ||| || | | | |||| ||| |||| ||| || Sbjct 1122 TCTTTTAATTTTTTAAAATTAAATCT---ATTATTTTCA---ACAAACTTGTTAAGTGCT 1175 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || || || || || ||||| | ||||| | |||||| | | || || || Sbjct 1176 ATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTG 1235 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 || | ||| || ||||| ||||| | || |||||||| ||| |||| || ||| Sbjct 1236 CAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAAGCA 1295 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 ||||| || | ||| ||||| || || |||||| ||| | | | ||| | |||||| Sbjct 1296 TCCTTATATAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATTGACTTCCA 1354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595020015760840