Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq55404 87.8 1e-12 >seq55404 Length=886 Score = 87.8 bits (96), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 108784 AACTTTACGTGGCTGGTCAATTCGGCGGCGCACATGTACGGCGACCGTCCGTTCGACAAG 108843 ||| | |||||||| || || || || || |||| | |||||| |||| ||| || Sbjct 311 AACGTGACGTGGCTCGTGAACTCTGCTGCTCACAAATGGGGCGACAAACCGTACGATAAA 370 Query 108844 AACATTTTCCCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCAC 108903 || ||| || ||||||| | || ||| || ||||||||||| || | ||| Sbjct 371 AATATTCAACCCTCTGAAAACATCTCCGTCTCGGTATTTGCTCTCGGCGAAGGTTTCCAC 430 Query 108904 AACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTGGGGAACGAC---TTT 108960 |||||||||||| |||||| | ||||| || | || ||| |||| ||| || || Sbjct 431 AACTACCACCACACGTTCCCGTGGGACTATAAAACAGCTGAGCTGGGAAACAACAGACTT 490 Query 108961 AATTTCACC 108969 ||||||||| Sbjct 491 AATTTCACC 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380318675484312