Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq4418 129 4e-25 seq6747 104 2e-17 seq173230 95.1 9e-15 >seq4418 Length=3433 Score = 129 bits (142), Expect = 4e-25 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| | ||| | ||| | ||||||||||| ||||| || || |||||||| | Sbjct 1088 CCACCTCTGAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGAATATTGTAATCA--G 1031 Query 15010 AGAAT--TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| ||| | ||||| | ||| || || || | ||||| | ||||||||| | Sbjct 1030 ATAATGTTCTTCCATCTTCAAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGGG 971 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||| ||||| |||||| || ||| ||||||| ||||| | ||||| Sbjct 970 GAATGCCTTCTTTGTCCTGAATTTTTGCCTTGACATTTTCTATTGTATCAGAAGCTTCTA 911 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || || || ||||| || ||||| ||||| || ||||||||||| Sbjct 910 CTTCCAATGTGATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGCAT 862 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 |||||| || | ||||| |||||||| || || ||||| ||| | | | ||||| Sbjct 615 AACTAAGTGCAAAGTAGATTCTTTTTGAATATTATAATCAGATAGAGTGCGTCCATCTTC 556 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || |||||||| ||| | |||| | ||||||||| ||||| ||||||||||| Sbjct 555 CAACTGTTTGCCGGCGAAAATCAGTCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 496 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| || ||| ||||||| ||||| | ||| || || || || || || || Sbjct 495 AATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTCTT 436 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || ||||||||||||||||| Sbjct 435 GCCAGTCAGTGTCTTTACAAAAATTTGCAT 406 Score = 102 bits (112), Expect = 6e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || || || ||||| || | |||||| || ||||| || ||||| || || Sbjct 860 CCACCTCTCAGTCGTAGTACTAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTC--TG 803 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || | ||||| | |||||| || || | || | | ||||||||| | Sbjct 802 ACAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGG 743 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || ||||| || |||||| || ||| |||| || ||||| | || | Sbjct 742 GAATCCCCTCCTTATCTTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGGCTCAA 683 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||||| || || ||||| || |||||||||||||||||||| Sbjct 682 CTTCAAGAGTAATAGTCTTGCCTGTAAGTGTTTTTACAAAAATTTGCAT 634 Score = 95.1 bits (104), Expect = 9e-15 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| | ||| || || ||| | ||||| | |||||||| ||||| ||||||||| Sbjct 332 TCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTG 273 Query 15082 TCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAAT 15140 || ||| ||||| || ||| |||| || || || ||| || ||||| ||||| Sbjct 272 TCTTGAATCTTTGCCTTA-ACATTTTCGATTGTGTCAGATGCTTCCACTTCTAAAGTAAT 214 Query 15141 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| ||||| |||||||||||||| Sbjct 213 AGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 178 >seq6747 Length=1699 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||||| | | || || |||||||| || ||||| || || |||||||| || Sbjct 867 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATC--TG 924 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || || | ||||| ||||| || ||||| | || | |||||| || || || Sbjct 925 ACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTG 984 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || || || ||||| ||||| |||||| |||| || || || ||| | Sbjct 985 GGATGCCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAA 1044 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | ||||| ||||| ||||| || || || ||||| ||||||||||||||| Sbjct 1045 CTTCTAACGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCATA 1094 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 |||||||| | ||||| |||||||| |||||||| || ||| | | | || || Sbjct 429 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCC 488 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 || ||||| ||||| | || | |||||||||||| ||||| || ||||| || Sbjct 489 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTGG 548 Query 15088 AT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || ||||| || ||| |||| ||||| ||| || || || || || || ||||| Sbjct 549 ATCTTTGC-CTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATAGTTTT 607 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || ||||| || |||||| Sbjct 608 CCCAGTAAGTGTCTTAACAAAGATCTGCATA 638 >seq173230 Length=587 Score = 95.1 bits (104), Expect = 9e-15 Identities = 93/119 (78%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 ||||| ||||||||||| |||||| ||||||| |||| ||||| ||| | ||| Sbjct 1 GGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCA 60 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185 || || || |||||||||||||| || || ||||| || ||||| ||||| ||||| || Sbjct 61 ACTTCCAAAGTAATGGTTTTACCAGTGAGTGTTTTCACGAAAATCTGCAT-TTTGATAT 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356030738881055