Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq48588 105 8e-18 >seq48588 Length=2845 Score = 105 bits (116), Expect = 8e-18 Identities = 356/553 (64%), Gaps = 6/553 (1%) Strand=Plus/Plus Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121 |||||||||||| ||||||||||||||||| ||||| ||| | | |||| ||| Sbjct 810 TCCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTTCCTTGATATGTGCTGTAT 869 Query 116122 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 116181 | ||| || || || ||||| | || || || | || | | ||| ||||| ||| Sbjct 870 GCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCA 929 Query 116182 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATA 116241 || || | ||| | | || | || || | | | | ||| | | Sbjct 930 AATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGGTATTCTCATCAACACA 989 Query 116242 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 116301 ||| ||| || | ||| || ||||| | || || || || || |||||||| || || Sbjct 990 AATGTATCTGCCATACCCTGAACACCAATACCGATAGGTCGGTGCCTCATATTTGAAGTT 1049 Query 116302 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 116361 || || |||||||| || ||| || || | |||| ||||| || ||| Sbjct 1050 TTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACA 1109 Query 116362 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATAC 116421 | |||||||||||| | | |||| ||| ||| || | | | |||| ||| || Sbjct 1110 ATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCT---ATTATTTTCA---ACAAAC 1163 Query 116422 TTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCT 116481 || ||| || || || || || || ||||| | ||||| | |||||| | Sbjct 1164 TTGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGC 1223 Query 116482 ATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 116541 | || || || || | ||| || ||||| ||||| | || |||||||| ||| Sbjct 1224 ACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTC 1283 Query 116542 GTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 116601 |||| || |||||||| || | ||||||||| || || |||||| ||| | | | | Sbjct 1284 CTGTTGCAAGCATCCTTATATAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATA 1343 Query 116602 ATAGCCTTCCATA 116614 || | |||||||| Sbjct 1344 ATTGACTTCCATA 1356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611110511116680