Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4418 127 5e-24 seq6747 114 3e-20 >seq4418 Length=3433 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || |||||||| || || || || || || | ||||| |||| || || ||| Sbjct 1079 AGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCTT 1020 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| || ||||| ||||| || || | | ||| ||||| || ||| |||||| Sbjct 1019 CCATCTTCAAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGGGGAATGCCTTCT 960 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||| ||| ||| || ||| | || || | | |||||| ||||| ||| Sbjct 959 TTGTCCTGAATTTTTGCCTTGACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTG 900 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || |||||||| |||||||| Sbjct 899 ATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTG 865 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 ||| | ||| || | ||| | |||||| ||||| || | || ||||| | || || | Sbjct 396 AAGACGCAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCG 337 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||||||| |||||||||||||| || | | || ||||| ||| ||| ||||| Sbjct 336 TCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTC 277 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || ||||||||| ||| || ||||| ||||| | || ||| || || || || Sbjct 276 CTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGATGCTTCCACTTCTAAAGT 217 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| ||||||||||| Sbjct 216 AATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTG 181 Score = 109 bits (120), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| | ||| || || ||||| | || || |||| | ||| | |||||| Sbjct 618 CAGAACTAAGTGCAAAGTAGATTCTTTTTGAATATTATAATCAGATAGAGTGCGTCCATC 559 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||| ||| || |||||||| || || | ||| ||||| ||| ||| ||||| || Sbjct 558 TTCCAACTGTTTGCCGGCGAAAATCAGTCTCTGTTGGTCTGGAGGAATACCTTCCTTGTC 499 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||| ||| ||| || ||| | || || | | ||| || ||||| ||||| || Sbjct 498 TTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGT 439 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || ||||||||||| Sbjct 438 CTTGCCAGTCAGTGTCTTTACAAAAATTTG 409 >seq6747 Length=1699 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || ||||| || |||||||| | ||| || |||| | || Sbjct 1101 CGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATGTTATAATCAGATAGTGTA 1160 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| || ||||| || || ||||| | || ||||| || ||| ||| Sbjct 1161 CGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTTTGTTGGTCTGGGGGAATACCT 1220 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || |||||| ||||||| ||| | ||||| | || |||||| || || Sbjct 1221 TCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCCGATGGTTCTACCTCTAAG 1280 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || ||||| || ||||| || || Sbjct 1281 GTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTG 1318 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || | ||| || || ||||||| ||||||||| | || ||| Sbjct 417 CGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTG 476 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| ||| || || || |||||||||||||| ||||| || ||| || Sbjct 477 CGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCC 536 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || |||||| ||| || ||||| ||||| | || || || ||||| Sbjct 537 TCCTTATCTTGGATCTTTGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAA 596 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || || ||||| || || Sbjct 597 GTGATAGTTTTCCCAGTAAGTGTCTTAACAAAGATCTG 634 Score = 100 bits (110), Expect = 7e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | ||||||||| | | ||| Sbjct 1329 CGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTG 1388 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| |||||||| |||||||| ||||||||||| || || || || Sbjct 1389 CGGCCGTCTTCCAATTGCTTTCCAGCGAAGATAAGACGCTGCTGATCAGGCGGGATGCCC 1448 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || || || ||| || || || ||| | || || | | ||| || |||| Sbjct 1449 TCTTTGTCTTGGAT-TTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAG 1507 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || ||||| |||||||| || Sbjct 1508 AGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTG 1546 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || ||||| || || | ||||| || | |||||| | |||||| Sbjct 882 AGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCTGACAAAGTGCGACCATCT 941 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||| || || ||||| ||||||||||| || || || || ||| || Sbjct 942 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 1001 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| || ||| | ||||| | | ||| || || ||||| || || Sbjct 1002 TGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAACGTAATTGTT 1061 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| ||||||||||| Sbjct 1062 TTTCCAGTAAGTGTTTTAACAAAAATTTG 1090 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| ||||| || || | |||||||||| | ||| | ||||| |||||||| Sbjct 662 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCCAGCTG 721 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || || || || ||| || || || || ||||| Sbjct 722 CTTACCAGCAAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCCTTGTCTTGTATCTT 781 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || ||| | ||||||| || ||| || || || ||||| || || || || Sbjct 782 GGCTTTAACATTTTCAATAGTGTCTGATGGTTCCACTTCTAATGTGATAGTTTTCCCTGT 841 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||| || || ||||| || || Sbjct 842 GAGTGTCTTTACAAAGATCTG 862 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 ||||||||||| |||||||| |||||||| || | ||| | |||| |||||| | || Sbjct 1423 CTTATCTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTACAACATTCAA 1364 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||| |||||||||||| | || ||| | ||||| Sbjct 1363 AAAGAATCTACTCTTCACTTGGTATTGCGTCTTCG 1329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174200961024041