Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq6932 152 6e-32 seq4418 107 2e-18 seq6747 98.7 1e-15 >seq6932 Length=2340 Score = 152 bits (168), Expect = 6e-32 Identities = 808/1271 (64%), Gaps = 62/1271 (5%) Strand=Plus/Minus Query 98701 GAAAACAATGTGCCTTTTACA-AAACACACGGACAAAGTTACGGGGGCTTATTTTGTAGA 98759 ||||| ||| ||| |||| ||||| ||| |||||| || || || || ||||| Sbjct 1479 GAAAAAAATAAGCCATTTAAGCAAACATCTGGA-AAAGTTGTAGGCGCCTACTTCGTAGA 1421 Query 98760 ATGGGGTGTTTACGATCGCAAATTTCCAGCAGATAAAGTGCCTATCCCCAATTTGACACA 98819 ||||||||| || | | ||||| || | ||| | ||||| || ||| | || || Sbjct 1420 ATGGGGTGTCTATCCTAGAAAATTCCCCGTGGATCGTATACCTATACCTAATCTTACTCA 1361 Query 98820 CCTTTTGTATGGTTTTATCCCCATTTGCGGAGGCGACGGTATAAACGACAGTCTAAAACA 98879 | | ||||| ||||| || |||||||| || || || ||||| ||||| ||||| | Sbjct 1360 TTTGCTCTATGGCTTTATTCCAATTTGCGGCGGTGATGGCATAAATGACAGCTTAAAAGA 1301 Query 98880 AGTGCCGGGATCTTTTGAGACGTTACAAAAATCGTGCGATAAGAGAGATGATTTCAAGGT 98939 | || ||| | | | || || || | || || ||||| || Sbjct 1300 GATCGAAGGCAGTTTCCAAGCACTGCAGCGGTCCTGTAGCGGCCGTGAGGACTTCAAAGT 1241 Query 98940 GAGCATCCACGATATTTACGGTGCTCTACAGAAACCACAACAGGG--TGTCTCCGATTAT 98997 ||||||||| | | || |||| ||||||||| | || ||||| || | Sbjct 1240 CTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCG--TGG 1183 Query 98998 AACGAGCCTTACCGTGGCAATTTCGGACAGCTTATGGCCATACGTAAACA---CAACCCA 99054 |||||||| ||| ||||| || || || | ||| | || ||||| | ||| Sbjct 1182 AACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTA---AAACAAGCCCGCCCT 1126 Query 99055 CATCTAAAAATCCTACCCAGTATCGGTGGTTGGACTCTTAGCGACCCCTTCTATTTTTTC 99114 | | || || || ||| ||| ||||| ||||| || ||| || |||| ||||| Sbjct 1125 GAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTCGCCGATCCTTTCTTCTTTTTA 1066 Query 99115 GCCGATGATTACAAGCGCAAAGTGTTCGTAGACTCGGTTCGTGAATTCCTACAGGTGTGG 99174 | || | | ||| | | | || || | || ||| || || || | ||| Sbjct 1065 GTTGACAAATCTAAGAGAACACGATTTGTGCAGTCAGTTAAGGAGTTTCTTCTAACATGG 1006 Query 99175 AAATTTTTCGACGGTGTAGACATCGACTGGGAGTTTCCTGGCGGAAAGGGGGCCAACCCT 99234 ||||| || || ||||| || ||||| |||||||| ||||| || || || || |||||| Sbjct 1005 AAATTCTTTGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGTAAAGGTGCTAACCCT 946 Query 99235 GAAGTAGGAAATCCTAATGAGGACGGAAACACTTATGTCACACTTCTGCAAGAGCTTCGT 99294 || | || | || || || || | |||||| | | || |||| | ||| Sbjct 945 GATCTCGGTAGCCCA---GAAGATGGTGATTGTTATGTAAGTTTGATGAAAGAATTACGT 889 Query 99295 TTGATGCTTGACGAATTGGGTGTG-GCCAATAAACGTGTT---TACGAACTGACAAGTGC 99350 |||||| || || | | | || || || || |||||| | || ||| Sbjct 888 GAGATGCTCGATGA----GCTCTCAGCTAAGAATGGTAAGAAATACGAATTAACTTCTGC 833 Query 99351 CGTGGGCGCCGGTTACGATAAAATCGACGTGGTCGATTACTCTACAGCCAG--TCAATAT 99408 | || | || | ||||||||| | || || || |||| || || |||| || Sbjct 832 TATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGA-----CTACGGCAAGGCTCAAAAT 778 Query 99409 T---TGGACCATGTGTTTTTAATGAGTTACGATTTTAAAGGCGCCTGGTCCAACACCGAC 99465 | |||| ||| | || || |||||||| || || || || |||||||| || || Sbjct 777 TATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTCAAATGAT-AC 719 Query 99466 T-TGGGTCATCAAACACCATTGTATGCACCATCGTGGAACTCCGAAGAGAGATACACAAC 99524 | | || ||||||||||||||||| || || | |||| || | || | |||||| | Sbjct 718 TCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAGTCCCAAGGAAACTTACACATC 659 Query 99525 CGATTATGCGGTTAAACAGCTATTAAAGAAAAAAGTGCCTTCTCACAAGATTGTAGTGGG 99584 || | | || ||| | | || | |||| | || | ||||||||||| || Sbjct 658 TGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTAAGAAGATTGTAGTAGG 599 Query 99585 AGTCGCCATGTACGGCAGAGGATGGAGTGGAGTGCATGACTACAAAAATAATAACGTTTT 99644 || |||||||| || | || |||| ||| || ||||| ||| || | || | || Sbjct 598 TGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGATTACGAAGACAACATTCCCTT 539 Query 99645 TACGGGTGTGGCCACGGGACCGGTAAAAGGCACCTGGGAAAACGGTGTTGTTGATTATAG 99704 || || || || ||||| || ||||| || ||| || |||| || |||||||| || Sbjct 538 CACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGTGGTTGATTACAG 479 Query 99705 GCAGGT--CGAA-GA----GCTCAA---AAACAACAATTACACATACGCATACGACAAAG 99754 | || | |||| || |||||| || |||| || |||||||| | Sbjct 478 GGAGATTGCGAATGAAGTTGCTCAAGGCAAGTGGGAATTTCA-------TTACGACAATG 426 Query 99755 TGGCCGAGGCGGCATATATTTACGGTGGCGCCGAC--CAGGCGTTGAATTTAATTTCTTA 99812 | ||| | || | ||| | | | | | | || || | ||| ||| | || Sbjct 425 TCGCCCAAGCTCCTTATGTCTTCAG-ACCATCAACTGGAGACCTTG----TAA---CCTA 374 Query 99813 CGACGACTCATCGTCTGTACTAGCAAAAGGTAATTACGTTTTACAAAACAATCTCGGAGG 99872 ||| | | || || | | ||| ||||| || || | | ||||| || || || Sbjct 373 TGACAATGCTAGATCAGTTATTGAAAAGGGTAAATATGTGAGAAATAACAAACTAGGTGG 314 Query 99873 TTTATTTGCTTGGGAAATCGATGCCGACAACGGTGACTTGTTAAACGCCATGAACACAGG 99932 | | ||||||||||||||||| || || |||||||| | | || |||||||||| || Sbjct 313 TCTCTTTGCTTGGGAAATCGACGCTGATAACGGTGATCTACTGAATGCCATGAACATGGG 254 Query 99933 TTTGGGTAACA 99943 | | ||||||| Sbjct 253 TCTTGGTAACA 243 >seq4418 Length=3433 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||||| ||||| ||||| || ||||| || ||||| ||||| || Sbjct 404 CCACCCCTAAGACGCAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGAC 345 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || || ||||| |||||||| ||||| | || ||||| | || Sbjct 344 AGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 285 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| ||||| ||| | | | | ||||| | |||||| Sbjct 284 ATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGATGCTTCCACT 225 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || |||||||| ||||| ||||||||||| |||||||| Sbjct 224 TCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 178 >seq6747 Length=1699 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 46390 ATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTG 46449 |||||| ||| || |||||||| |||||||| || |||||||| | || || | ||| Sbjct 434 ATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTG 493 Query 46450 CTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509 || || || || || | ||||| ||||| | || | || |||||| || |||||| Sbjct 494 TTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTGGATCTT 553 Query 46510 CTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 ||| | | | | |||||| | ||||| |||| ||||| ||||| || || Sbjct 554 TGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATAGTTTTCCCAGT 613 Query 46570 CAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||||||||| ||||| Sbjct 614 AAGTGTCTTAACAAAGATCTGCAT 637 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||||| ||| || |||| ||||| || ||| || || ||||||||||| || Sbjct 639 CCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 698 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || |||||||| || || || || | || || || || | || Sbjct 699 AGAGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATTAGACGTTGTTGATCTGGGGGA 758 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||||||||| ||||| || | | | | ||||| | |||||| Sbjct 759 ATACCCTCCTTGTCTTGTATCTTGGCTTTAACATTTTCAATAGTGTCTGATGGTTCCACT 818 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| ||||| || || || || || |||||||| ||||| Sbjct 819 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563030274993960