Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq296465 127 2e-24 seq6747 120 3e-22 seq4418 104 2e-17 seq94045 102 8e-17 seq8699 91.5 1e-13 seq98010 87.8 2e-12 seq2870 84.2 2e-11 seq2868 82.4 8e-11 >seq296465 Length=573 Score = 127 bits (140), Expect = 2e-24 Identities = 143/190 (75%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| ||||| ||||| ||||| ||||||||||| || |||||||| || || ||||||| Sbjct 126 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAGCCCTCGTTTTT 185 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | | ||||||||| | || || ||||| || || || | ||||| || ||||| |||| Sbjct 186 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAG 245 Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096 | | | || || || || |||| |||||| ||||||| | | |||||| || | Sbjct 246 CGATAATACGTTCTCCAAATATGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 305 Query 133097 CCTT-TTCTT 133105 |||| ||||| Sbjct 306 CCTTCTTCTT 315 >seq6747 Length=1699 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || ||||| ||||| | || || ||| | || Sbjct 637 ATGCAGATCTTTGTTAAGACACTTACTGGGAAAACTATCACTTTGGAGGTGGAGCCATCC 578 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| |||| | ||| |||| || || ||||| |||||| | |||||| Sbjct 577 GACACTATCGAAAATGTTAAGGCAAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCAA 518 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | || || |||||| |||| || | ||||| || ||||||||| Sbjct 517 CAGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTACAAC 458 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||| | || ||||||| || || ||| Sbjct 457 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGT 422 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || || |||||||||||| | || || || | | Sbjct 1322 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCTTAGAGGTAGAACCATC 1263 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| || ||||| | || | ||| |||| |||||||| || |||||| | |||| Sbjct 1262 GGACACTATTGAAAACG-TGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACC 1204 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| ||||||||| || || ||||| ||||| || | || || || || || | Sbjct 1203 AACAAAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATA 1144 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| ||||||||| | || || ||||| || ||||| | | ||||| Sbjct 1143 ACATTCAAAAGGAATCTACTCTACATTTAGTATTGCGTCTTCGTGGCGG 1095 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || || ||||| || | || || || || | Sbjct 1549 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 1490 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 || | | ||| | |||| ||||||| ||||||||||| || |||||| || || Sbjct 1489 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCAT-CCCGCCTGATCA 1431 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || || |||| |||| ||||| || ||||||||| Sbjct 1430 GCAGCGTCTTATCTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTACAA 1371 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||| ||| | || || || ||||| ||||| Sbjct 1370 CATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGT 1334 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 ||||||| |||||||| || ||||| | || ||||| || || |||| ||||||||| Sbjct 1693 AAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAACAACGTCTTATTTTCGCGGGCAAG 1634 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 || | || || | || || || ||||||||||||||||| ||| | || ||||| Sbjct 1633 CAATTAGAAGATGGTCGTACACTTTCTGACTACAACATCCAAAAAGAATCTACTTTGCAT 1574 Query 38448 TTGGTGCTGCGTTTGAGAGGCGG 38470 || || || ||||| ||||| || Sbjct 1573 TTAGTACTTCGTTTAAGAGGTGG 1551 >seq4418 Length=3433 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || |||||||| || || | || || || || | Sbjct 178 ATGCAAATTTTTGTTAAAACACTGACTGGCAAAACTATTACTTTAGAAGTGGAAGCATCT 237 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| |||| | ||| || | ||||| || || ||||| | |||||| Sbjct 238 GACACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAA 297 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | | |||| ||| || || || ||||| || | ||||| || ||||| || Sbjct 298 CAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACACTGTCAGACTATAAT 357 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || |||||| |||| |||| |||||||||||| | || || || Sbjct 358 ATTCAGAAGGAATCGACTTTGCACTTGGTGCTGCGTCTTAGGGGTGG 404 >seq94045 Length=338 Score = 102 bits (112), Expect = 8e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 133382 CCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATAC 133441 ||||||| | ||| || || || | ||||||||||| || || |||||||| ||||| Sbjct 309 CCTTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCT 250 Query 133442 TCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACA 133501 ||| ||||||| |||||| || || || || || || || | |||||||| | ||||| Sbjct 249 GCCATATGTCCGGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCTCTCAACA 190 Query 133502 GCGGCTCCGCTTGGGGGTCGAACG 133525 | ||||| ||| ||||| |||| Sbjct 189 GAGGCTCAAGTTGTGGGTCAAACG 166 >seq8699 Length=3937 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 126654 GGGCAACCGGAATAGTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCC 126713 |||||| | |||| |||||| ||||| || |||||||||||| ||| || || || | Sbjct 1716 GGGCAAGCAGAATGGTTGGCAGGGTGCGGTCCTCCGCAGTTGGCGCAGGTCGCGAGCTCT 1657 Query 126714 TCACGGGGGCGGCTACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGC 126773 || || ||||| |||| || |||||| ||||| || | ||| ||||| | Sbjct 1656 TCGCGTGGGCGTGGGCAGTCTCGCGCAAAGTGTTCCCCTCCACACCTCACGCAGGCCATA 1597 Query 126774 GGTCGGTGACAGTGATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGG 126833 | ||||||||| ||||| ||| || ||| |||||| || || || || || ||| Sbjct 1596 CGCCGGTGACAGCCGTGGCTCGAGTGCCGGAATGCTTGGCATCGGTGGCACTGAGCCGGG 1537 Query 126834 CGGCGCTTGC 126843 | ||||||| Sbjct 1536 CCACGCTTGC 1527 >seq98010 Length=2704 Score = 87.8 bits (96), Expect = 2e-12 Identities = 112/154 (73%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 132550 TAAAAGTCCGCATCCAAAGTAAAGGTGTCGTCCTTGGCA---AACATCACGCCAAATTTT 132606 ||||| || ||||| ||||| || | |||| | | | |||||| || | || Sbjct 2434 TAAAATTCTGCATCTAAAGTGAACACATTGTCCATAGGTTGCACCATCACTCCCCACTTC 2493 Query 132607 TGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTC 132666 || ||||| || || || |||||||| || || ||||| || ||||| ||||| || || Sbjct 2494 TGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAATGAAATAAGATTC 2553 Query 132667 ATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCT 132700 |||||||| || || || |||||||||||||| Sbjct 2554 ATAAAATCGAATGGATTCTGTGTGTTGTAGTGCT 2587 >seq2870 Length=1466 Score = 84.2 bits (92), Expect = 2e-11 Identities = 178/263 (68%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 126607 GGGCTAGGGGGCCCGCACGCCGATTCCGGGCCTCACGTTGAATAACG-GGGCAACCGGAA 126665 |||| | || ||| || | | |||||| || || || || || | ||||| | || Sbjct 372 GGGCCACGGTGCCGGCCCTCTTATTCCGCGCTTCGCGACGA-TACTGCGGGCAGGCCGAG 430 Query 126666 TAGTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCCTCACGGGGGCGG 126725 | |||||| ||||||||||||||||||||| ||| || || || | || | ||||| Sbjct 431 TGGTTGGCTGGGTGGGGCCCTCCGCAGTTGGCGCAGGTGGCAGGTTCTTCCGGTGGGCGC 490 Query 126726 CTACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGCGGTCGGTGACAG 126785 ||||| | || ||| || | ||||| | ||| ||||| | ||||| ||| Sbjct 491 GGACAGTCCTGCGCAAAGTGCTCCTCCCCGCACCTCACGCAGGCCTTGCGCCGGTGGCAG 550 Query 126786 TGATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGGCGGCGCTTGCCG 126845 ||||| ||| |||||| |||||| | || || || || |||| || |||| Sbjct 551 CCGTGGCTCGAGTGCCGAAATGCTTGGCATCTGTGGCACTGAGCCGGGCCACGTTTGCTT 610 Query 126846 CGCCACGCCTCAATGATGACGCC 126868 | ||| || || ||| ||| ||| Sbjct 611 CTCCAGGCTTCGATGGTGATGCC 633 >seq2868 Length=1944 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126654 GGGCAACCGGAATAGTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCC 126713 ||||| | || | |||||| ||||||||||| ||||||||| ||| || || ||| || Sbjct 7 GGGCAGGCCGAGTGGTTGGCTGGGTGGGGCCCCCCGCAGTTGGCGCAGGTGGCAGGCTCC 66 Query 126714 TCACGGGGGCGGCTACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGC 126773 || | ||||| ||||| | ||| ||| || | ||||| | ||| ||||| Sbjct 67 TCCAGAGGGCGCGGACAGTCCTGCGCGAAGTGCTCCTCCCCGCACCTCACGCAGGCCTTG 126 Query 126774 GGTCGGTGACAGTGATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGG 126833 | || || ||| ||||| ||| || ||| ||||| | || || || || ||| Sbjct 127 CGCCGATGGCAGCCGTGGCTCGAGTGCCGGAATGCCTGGCATCTGTGGCACTGAGCTGGG 186 Query 126834 CGGCGCTTGCCGCGCCACGCCTCAATGATGACGCC 126868 | ||| |||| | ||| || || ||| ||| ||| Sbjct 187 CCGCGTTTGCTTCTCCAGGCTTCGATGGTGATGCC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498218856200320