Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq48588 172 6e-38 >seq48588 Length=2845 Score = 172 bits (190), Expect = 6e-38 Identities = 904/1426 (63%), Gaps = 33/1426 (2%) Strand=Plus/Plus Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966 ||| ||||| | | | |||||| | || || || | || | |||||||| |||| Sbjct 623 AAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTTCAAAAGATTC 682 Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 | | || || | |||||||| || ||||| |||||||| ||||| ||||| ||| || Sbjct 683 AGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTTGGCATAGGTGCTATCAATAGAGAATT 742 Query 106027 ACGAAGACCCTTTTCCTTG--ATGCGTTCCTTGAGAACATCCCAGT--CGTAGTTGAGCT 106082 || | ||| | || ||| || ||| ||||| ||| |||||| | || | | Sbjct 743 GCGCAAACCATGTT--TTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCAAAGGTCTGTA 800 Query 106083 TG-GTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCA 106141 | |||| |||||||||||| | || || | |||||| | ||| || | | Sbjct 801 GGAGTTTTG---TCCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTTCCTTGA 857 Query 106142 AATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGA 106201 |||| || | |||| ||| || |||||||| || || || | | | | | Sbjct 858 TATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAA 917 Query 106202 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 106261 || || |||||||| || | ||| | | |||| || || | | ||| Sbjct 918 TAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAG-GTAT 976 Query 106262 CGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 106320 || ||| | |||| ||| || | ||| |||||||| | ||| ||||||| ||| | Sbjct 977 TCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGTCGGTGCCT 1036 Query 106321 CATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 |||||| || || || ||| || |||||||| || ||||||||| ||| Sbjct 1037 CATATTTGAAGTTTTTGCT---TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTT 1093 Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT 106437 || ||||| || ||||||||||||||||| | | ||||| | ||| ||| | | | Sbjct 1094 TAAATTTTGAGTCACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAA---TCTATT 1150 Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 | |||| ||| |||| ||| || || || || | ||||| || ||| ||||| Sbjct 1151 ATTTTCA---ACAAACTTGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATC 1207 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 | ||||| | | || || || || | ||| || ||||| || || | ||| Sbjct 1208 TTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATT 1267 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||||| |||||||| ||||||| |||||||| || | ||| || || || || ||||| Sbjct 1268 TTTTTGATTACTCTTCCTGTTGCAAGCATCCTTATATAACATATATGGTGTACCAGTCTC 1327 Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGT-TGGCCC 106676 | || | | | ||||| |||||| | || ||| || || | | || Sbjct 1328 CACTTGAGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGAC-TTGTTTTATAAACC 1386 Query 106677 GTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGA 106736 || || | || || || | || || ||||||| ||||| || ||| | || Sbjct 1387 GTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCATAACAGTCAGCGA 1446 Query 106737 GACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 106796 | || || | | ||||| | ||| ||| | || ||| || || | |||| Sbjct 1447 GGCCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACTCTTTTCA 1506 Query 106797 TGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCAC 106856 | || || ||||| ||||| | || |||| || ||||| | ||||| | || Sbjct 1507 TAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTTGCTCTCATTTCTTCCTTAC 1566 Query 106857 CTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 106916 || ||| ||| || |||||||| | || ||||| ||||| ||||| | || | Sbjct 1567 CTGTGTTCTTCTTTAAATCTAGGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAA 1626 Query 106917 CTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 106972 ||| | | || | || | ||| |||||| |||||| | || || ||| Sbjct 1627 TTGCAAATGCACCGGGACGTTTG-TTTCCACCTTGATCTACATATCTGGCAGTATTGTTG 1685 Query 106973 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 107032 | || | | |||||| | | ||||| ||| ||||| || || ||| ||| Sbjct 1686 TACACTCTCAACATTGGCACTAGACCATTTGAAACCCCATTAGTACCAGCTATATAAGAC 1745 Query 107033 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 107092 | |||||| | ||| | || | || || || || || | || || ||| Sbjct 1746 CCCTGGGCTCTGATGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAATTAAT 1805 Query 107093 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 107152 ||||| | | | ||| || | ||||| | || || || || | || |||||| Sbjct 1806 GCACATTGTTTTAAAGTATCAAAAATACCTTCAATACTATCGTCTTTCATAGCTATAAGG 1865 Query 107153 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 107212 |||||| ||| | ||| || || |||||| | || ||| || || || |||| || Sbjct 1866 AAGCAAGAGGAAAGCTGTGGCCTCGGTGTAGCTGCTGAGAACAGTGTAGGGCTTGCATGT 1925 Query 107213 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271 | || ||| | | |||||| | | || || | | || |||||||||||| || Sbjct 1926 GT-AAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACC 1984 Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCC 107317 || ||||| |||| || | ||||| ||||| ||| ||| ||||| Sbjct 1985 ATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGTCTTTCC 2030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587676017880520