Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6932 172 4e-38 seq6747 105 4e-18 >seq6932 Length=2340 Score = 172 bits (190), Expect = 4e-38 Identities = 585/899 (65%), Gaps = 27/899 (3%) Strand=Plus/Plus Query 5654 TCGTGCACTCCGGACCACCCACGACCGTACATGGCTACACCCACAATTAGCTTCTTCG-A 5712 || || || || | ||| |||||||| |||||||| ||||| || | | |||||| | | Sbjct 560 TCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTACTACAATCTTCTTAGGA 619 Query 5713 TTCGACGCTCTGATTTAACAGACGCTTGATTGAAAAATCTGTCGTGTATGTCTCGCCTGG 5772 ||| || | ||| |||| || | | || || | ||||| || || | ||| Sbjct 620 TTC-ACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTTC-CTTGG 677 Query 5773 GT-TCCACGATGGAGCGTACAGAGGTGTCTGGTGTCCCAGA---TCCGTTAACGACCAGG 5828 | |||| | || ||||||| ||||| || ||||| ||| || || ||||||| Sbjct 678 GACTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCATTT---GACCAGG 734 Query 5829 CACCCTTGTAGTCGTACGTCATAACAAAGATGTGATCAAGATACCTTTGTGCGCTGGCGT 5888 | |||||| |||| || |||| | || || ||||| | ||| |||| || || ||| Sbjct 735 CTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCGT 794 Query 5889 AGTCGACAACGTCGATCTTGTCATGTCCCGCGCCGATAGCACTTGTCAATTGTAACCGTT 5948 |||| ||||| | ||| || || ||| | || |||||| || |||| | | Sbjct 795 AGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTTAATTCGTATTTCT 854 Query 5949 TACCCCGCTTCTCGCCCAACTCGTCAAGCATCACGCGAAGTTCCCGCAACAAAAGAGTGT 6008 |||| ||| | | ||| || |||||| | || | ||| || |||| | Sbjct 855 TACCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTACAT 914 Query 6009 ACGTATTGCGGTCCACCTCGGCATTACCCAACACAGGATTAGCACCCTTTCCACCCGGAA 6068 | || | || | | ||| |||| | |||| |||||||| || ||||| || | Sbjct 915 AACAATCACCATCTTC-TGGGC--TACCGAGATCAGGGTTAGCACCTTTACCACCAGGGA 971 Query 6069 ACTCCCAGTCAATGTCCACTCCGTCAAAGAACTTCCATGTCTCCAGAAACTCGCGGACAC 6128 ||||||| || || || || || |||||||| |||||||| |||||||| || Sbjct 972 ACTCCCAATCGATATCAACACCATCAAAGAATTTCCATGTTAGAAGAAACTCCTTAAC-- 1029 Query 6129 TTGTGAC-GAACACCTTACGTT----TGGAGTCATCGTTCATAAAATAAAACGGATCGCT 6183 |||| | ||| | ||| | || | || | ||| | || |||||| Sbjct 1030 ---TGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAGGATCGGC 1086 Query 6184 CAACGTCCACCCCCCTATGGATGGTAGGACTGTCAACGAAGGGTTGTGACGTTTGATGGC 6243 | ||||||||| || || || || || | |||| |||| | |||| | | Sbjct 1087 GAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTTTTAGTGA 1146 Query 6244 CATCAGCTGGCCAAAGTTACCCTTGTACGCTTCGTTGTACGCCTCAACGCCTTTCTGTGG 6303 ||| | ||||||||||| || ||||| | ||||| ||| | ||||| ||||| Sbjct 1147 CATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCACGAAGACAATCCTTTTTGTGG 1206 Query 6304 TTTTTGCAACGCGGCCCAGATGTCGTGAATACTCACCTTGAAGTCATCGCGACCAGCGCA 6363 |||||| || || ||||| ||||| || || |||||||| || || || || Sbjct 1207 TTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGCTACA 1266 Query 6364 GGATTTCTGTAGCGCCTCAAAG--GAATTGGGAATCTGCTTGAGGGCGTCGTTTATGCCG 6421 ||| ||| || || | || | || | |||| || | | ||| |||||||| Sbjct 1267 GGACCGCTGCAGTGCTTGGAAACTGCCTTCG--ATCTCTTTTAAGCTGTCATTTATGCCA 1324 Query 6422 TTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTCAGATTAGGTATTGGTACC 6481 | ||| || ||||||||||| || || || |||| || || ||||||||||| |||| Sbjct 1325 TCACCGCCGCAAATTGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGTATA 1384 Query 6482 TTGTCAATGGGAAACTGTCTGCCATACACTCCCCACTCCACGAAATACGCACCGACGAC 6540 || | ||| || | ||| ||| || ||||| || ||||| || || || || || Sbjct 1385 CGATCCACGGGGAATTTTCTAGGATAGACACCCCATTCTACGAAGTAGGCGCCTACAAC 1443 >seq6747 Length=1699 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||| | ||| ||||||||||| || ||||| || || | || |||| Sbjct 654 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCC 713 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||||||| || || ||||| ||||| ||||| || ||| | || | ||||||||||| Sbjct 714 TCCAGCTGCTTACCAGCAAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCCTTGTCT 773 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||||| ||| || | | || | || | || || || | || || ||| Sbjct 774 TGTATCTTGGCTTTAACATTTTCAATAGTGTCTGATGGTTCCACTTCTAATGTGATAGTT 833 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| ||||| ||||||||||||||| Sbjct 834 TTCCCTGTGAGTGTCTTTACAAAGATCTGCATA 866 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || ||||||||||| || || || | || |||| ||||| |||||||| ||||| Sbjct 1130 TTCCTTTTGAATGTTATAATCAGATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAA 1189 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | ||| |||||| | || | || || ||||| ||||| || ||| Sbjct 1190 AATGAGCCTTTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTT 1249 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | || | || || || | ||| ||||||||||| || |||||||| || Sbjct 1250 TTCAATAGTGTCCGATGGTTCTACCTCTAAGGTGATGGTTTTTCCTGTAAGAGTCTTAAC 1309 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 1310 AAAGATCTGCAT 1321 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| || ||||| |||||||| || | || |||| |||| |||||| || ||||| Sbjct 446 TTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAA 505 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || |||||| | || | |||||||| || ||||| || || Sbjct 506 GATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTGGATCTTTGCCTTAACATT 565 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | || | ||| || || | || || ||||| || || || ||||| || Sbjct 566 TTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATAGTTTTCCCAGTAAGTGTCTTAAC 625 Query 34970 AAAGATCTGCATA 34982 ||||||||||||| Sbjct 626 AAAGATCTGCATA 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323397111501144