Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq57455 226 2e-53 seq38414 183 2e-40 seq104799 168 5e-36 seq4418 163 2e-34 seq79385 154 1e-31 seq38930 138 9e-27 seq6747 129 5e-24 seq298189 123 2e-22 seq47401 114 1e-19 seq45218 111 1e-18 >seq57455 Length=2192 Score = 226 bits (250), Expect = 2e-53 Identities = 382/548 (70%), Gaps = 4/548 (1%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || |||||||| || |||||| |||||| ||||| ||||| | ||||| || Sbjct 2018 ATCGGGATTGATTTAGGTACAACATATTCTTGTGTCGGTGTGTGGCAGCACGGTAATGTG 1959 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 || || || || || |||||||| |||||||| || || ||||| ||| | ||||| || Sbjct 1958 GACATCATAGCGAACGATCAAGGGAACAGAACCACACCGTCTTACGTTGCCTTCACCGAT 1899 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 ||||||| || |||| || || || ||| | || | | || || | ||| || Sbjct 1898 ACTGAACGCCTAATTGGAGACGCGGCGAAAAACCAGGTTGCCTTAAACCCAATCAACACA 1839 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | ||||| || || || | || || || | | ||||| | | | ||| ||| Sbjct 1838 GTATTTGACGCAAAGCGGCTGATAGGCAGGAAATACGATGATCCTAAAATCCAGCAAGAC 1779 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294 | || ||||||||||| || | || |||| ||| ||||| | || ||| |||| Sbjct 1778 CTAAAACATTGGCCTTTTAAAGTAGTAAATGACAGTGGGAAACCAAAAATACAAGTTACT 1719 Query 550295 CATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTT-CATCTATGGTTTTAATGAA 550353 ||| ||||| ||||| ||| |||| ||| |||| || | |||||| |||| || Sbjct 1718 CATAAAGGAAAGACTAAACGTTTTGCACCTGAAGAAATAAGCAGC-ATGGTTCTAATAAA 1660 Query 550354 AATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTG 550412 ||||||| | || || | | | || |||||| || | | || || || || | Sbjct 1659 AATGAAAGAGACGGCGGAATCGTATTTGGGGTCAACC-GTGAGTAAAGCGGTTATCACAG 1601 Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472 | || || || || || ||||| ||||| ||||| || ||||||||||| |||||| | Sbjct 1600 TTCCTGCCTACTTCAACGACTCTCAACGACAAGCAACAAAAGATGCTGGTACTATTGCCG 1541 Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532 |||||||||||||||| || || || ||||||||||| || || | || || || | | Sbjct 1540 GACTTAATGTTCTTCGAATCATAAACGAACCTACTGCAGCAGCGTTGGCCTACGGGTTAG 1481 Query 550533 ATAAACAT 550540 ||||| || Sbjct 1480 ATAAAAAT 1473 Score = 196 bits (216), Expect = 4e-44 Identities = 531/803 (66%), Gaps = 16/803 (2%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGA 551848 ||| ||| |||||||||| || ||||| || || | | || || | | | ||| Sbjct 1365 TGGGGATACTCATCTTGGCGGAGAAGACTTCGACAGCCGCCTAGTCAACTTTTTAGCTGA 1306 Query 551849 AGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCT 551908 || |||||| ||||| | || || || | | | | ||||| || || ||||| Sbjct 1305 TGAGTTTAAAAGAAAACATAAGAAAGACCTGCATTCTAATTCAAAAGCGCTCCGCCGTCT 1246 Query 551909 AAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGA 551968 ||||| || || | || || || | ||||| ||| |||| || | | || || Sbjct 1245 CAGAACAGCAGCAGAGCGGGCTAAGCGCACACTTTCTTCTAGTACGGAAGCTAACATCGA 1186 Query 551969 AGTAGATTCATTATTTGAGGGAATTGA-TTATAAT-ACGCCTATTTCGAGGGCCAAATTT 552026 | | || | |||| || || || || || || | | | ||| | ||| | | |||| Sbjct 1185 AATTGACGCTTTATACGAAGGCATAGACTTCTATTCAAGAGTATCTAGAG--CAAGATTT 1128 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 || || | | ||||| | ||| ||| ||| | || ||||||||| | | | | | | Sbjct 1127 GAGGAGCTGAATGCTGATTTATTTCGAACAACTTTAGATCCAGTAGAAAAGGCTCTTAAA 1068 Query 552087 GATTCAAAGATTGATAA-ATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 || | || | || || | || || | || || ||| | ||||| || || ||| | Sbjct 1067 GACGCTAAATTAGACAAGAGTTCAATTA-ACGACATCGTGTTAGTTGGAGGCTCGACACG 1009 Query 552146 AATTCCTAAAATTCG---CGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 ||||| ||||| | | || || | | |||||||| ||||| | ||| Sbjct 1008 GATTCCAAAAATCCAGTCCCTTCTGCAAA---CATTCTTCAATGGAAAAAAGCTCAATTT 952 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | | |||||||| || || ||||| || || || ||| |||| ||||| || || Sbjct 951 ATCTATAAATCCAGACGAAGCCGTTGCATACGGAGCTGCAGTTCAGGCAGCCATACTAAG 892 Query 552263 TGG--ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCT 552320 ||| | |||| || || | ||| | || | || || ||||| |||||| | || Sbjct 891 TGGCGATAAAC--ATTCTAAGATCCAAGACGTTCTGCTAGTGGATGTGACTCCTTTGTCA 834 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380 |||||| |||| || | |||||| ||||||| || | | ||| ||||| ||| || Sbjct 833 CTTGGTATAGAGACGGCTGGAGGGGTTATGACAAAAATAGTAGATCGAAATGCTAAAATA 774 Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 || || ||| | || | ||| | ||||| | |||||||| |||| || || || Sbjct 773 CCCTGCAAACATTCCCAAACATTCACAACGTACGCTGATAATCAGCCTGCAGTCACTATA 714 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 ||| ||| ||||||||||||| | | |||||||| || ||| | | || || || || Sbjct 713 CAAGTTTATGAAGGAGAAAGAGCAATGACTAAAGACAACAATTTATTGGGGACCTTCGAT 654 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 || ||||| || || ||||| ||||| || || ||||| || ||||| || ||| | Sbjct 653 TTGACGGGTATACCGCCAGCTCCACGTGGTGTTCCCCAAATAGACGTTACCTTTGATTTA 594 Query 552561 GATGCCAATGGAATTTTGAATGT 552583 ||||| |||||||| || ||||| Sbjct 593 GATGCGAATGGAATATTAAATGT 571 >seq38414 Length=2658 Score = 183 bits (202), Expect = 2e-40 Identities = 392/584 (67%), Gaps = 4/584 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || ||||| || |||||||| |||||||| || |||||| |||| || Sbjct 2053 GCGATTGGAATTGATTTGGGTACCACATACTCGTGTGTTGGAGTATGGCAACATGGAAAC 1994 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || ||||| || || || || || | ||||| || || ||||| | ||||| Sbjct 1993 GTGGAGATCATTGCTAACGACCAGGGCAATCGGACTACCCCTTCATATGTCGCGTTCACC 1934 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | || |||||||| || | || | | || ||||||| ||| Sbjct 1933 GACACAGAGCGACTCATCGGCGATGCAGCCAAGAACCAGGTCGCTCTCAATCCTAACAAC 1874 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | |||||||| || || || || || | | ||| | || || | |||| Sbjct 1873 ACGGTGTTTGATGCAAAGCGATTGATCGGCCGCAAGTTTGACGACTCCAAGATTCAACAG 1814 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 || ||| | || | ||| ||| | || | || | | ||||||||| | || ||| | Sbjct 1813 GACATGCAACACTAGCCCTTCAACGTTATCAACGACTGCGGAAAACCTAAGATCCAAGTT 1754 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATC--TATGGTTTTAA 550349 | ||||| | ||| |||| | || ||| || | || | ||||||| | | Sbjct 1753 GATTTCAAAGGAGAGGCGAAAAAATTCGCCCCTGAAGAAGT--CAGCAGTATGGTTCTTA 1696 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 || ||||| ||| ||| |||| | | || |||| ||||| || | | Sbjct 1695 CAAAGATGAAGGAAATAGCGGAGGCTTATCTGGGAACGCAAGTGCGCGATGCCGTCGTCA 1636 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 ||||||| || || || || ||||| ||||| || || ||||||||||| ||| ||||| Sbjct 1635 CTGTACCCGCTTACTTCAACGACTCTCAACGCCAGGCCACTAAAGATGCGGGAGCTATTG 1576 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || || || || || || |||||||||||||| || ||||| ||||| || || || | Sbjct 1575 CAGGCCTCAACGTCCTGCGAATTATCAATGAACCCACAGCTGCCGCACTGGCCTACGGTC 1516 Query 550530 TTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 |||| ||| | | | ||||| || ||| | || |||||| Sbjct 1515 TTGACAAAAACCTTAAGGGAGAACGAAACGTATTAATATTTGAT 1472 >seq104799 Length=3621 Score = 168 bits (186), Expect = 5e-36 Identities = 254/355 (72%), Gaps = 12/355 (3%) Strand=Plus/Minus Query 368790 AGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCC 368849 || ||| || ||||| |||||||| ||||| ||||||||||| | ||||| |||||||| Sbjct 2460 AGAAGTATTTGATTGTTGGTTTGAGTCAGGATCTATGCCTTACGCTCAAAATCATTATCC 2401 Query 368850 ATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGA 368909 ||||| || |||| | |||||| | || ||| | | |||||||| | || Sbjct 2400 CTTTGAAAATAAAAAAGAATTTGATGA-----AATATTCCCAGCCA-ATTTTGTAGCTGA 2347 Query 368910 ATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTT 368969 | |||||||| ||| | ||||||||||| || || | || ||||| || || | || Sbjct 2346 AGGTATTGATCAGACAAGAGGTTGGTTTTACACATTAATCGTCTTATCTACTGCATTGTT 2287 Query 368970 CGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTG-TTAATGCATCTGATGGTC 369028 | ||||| | ||||||||| |||| | || ||| |||| || ||||| ||||| | Sbjct 2286 TAACAAACCTCCATTTAAAAATCTAATCGCAAATGG-ATTGATTCTGGCATCAGATGGGC 2228 Query 369029 AAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTG 369088 | || ||||| ||||| ||| |||||| | |||||| | | ||| || | || Sbjct 2227 AGAAAATGTCCAAAAGAAAGAAAAATTATCCAGATCCTTTGGATGTTGTTGGAAAGTATG 2168 Query 369089 GTGCTGATACTTTGAGATTATACCTATTGTCA--TCACCTGTAGTAAAAGCAGAA 369141 | |||||| |||| ||| | |||| |||| | ||||| || || ||||||||| Sbjct 2167 GCGCTGATGCTTTAAGACTGTACC--TTGTAAACTCACCAGTGGTTAAAGCAGAA 2115 >seq4418 Length=3433 Score = 163 bits (180), Expect = 2e-34 Identities = 171/222 (77%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||| | ||| ||||| ||||||||| |||||| |||||||||||||| || ||| Sbjct 1082 CTGAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGAATATTGTAATCAGATAATGTT 1023 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 ||| |||||||||||| || ||||||||||| | ||| || || || || ||||| ||| Sbjct 1022 CTTCCATCTTCAAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGGGGAATGCCT 963 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAG 563432 ||||| || ||||||||| || || || |||||||||| | ||| ||| | Sbjct 962 TCTTTGTCCTGAATTTTTGCCTTGACATTTTCTATTGTATCAGAAGCTTCTAC-TTCCAA 904 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | |||||| ||||| || ||||| |||||||||||||| Sbjct 903 TGTGATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGCAT 862 Score = 141 bits (156), Expect = 7e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || ||||| | || | |||| ||| || ||||||||| || | || || Sbjct 854 CTCAGTCGTAGTACTAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCTGACAGTGTG 795 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||||||||||||||| ||||||||||| || || || || || ||||| || Sbjct 794 CGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCC 735 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || ||||||||||||||| || || ||||||||||||| | | ||| ||| Sbjct 734 TCCTTATCTTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCAAGA 675 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| ||| || || ||||| ||||| || ||||||||||| Sbjct 674 GTAATAGTCTTGCCTGTAAGTGTTTTTACAAAAATTTGCAT 634 Score = 122 bits (134), Expect = 7e-22 Identities = 139/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||| || || | || || | | |||||| ||||| |||||||| ||||| | ||| Sbjct 360 AATATTATAGTCTGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCT 301 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||| || || |||||||| ||||| || |||||||| ||| || || || ||||| Sbjct 300 TTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGT 241 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 |||| || | || ||| | ||||| |||||| ||||| || |||||||| ||||||| Sbjct 240 GTCAGA-TGCTTCCACTTCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTT 182 Query 563471 GCAT 563474 |||| Sbjct 181 GCAT 178 Score = 120 bits (132), Expect = 2e-21 Identities = 162/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| ||||| || || | || | ||| |||||| |||||| ||||||| |||||| Sbjct 627 CCTTAGACGCAGAACTAAGTGCAAAGTAGATTCTTTTTGAATATTATAATCAGATAGAGT 568 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | | |||||| | ||||| ||||| ||||| ||||| || || || |||||||| || Sbjct 567 GCGTCCATCTTCCAACTGTTTGCCGGCGAAAATCAGTCTCTGTTGGTCTGGAGGAATACC 508 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGA 563431 ||| || |||||||||||| || || || |||||||||| | | || ||| | Sbjct 507 TTCCTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAG-AAGCTTCCACTTCCA 449 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||| || ||||| || || || || ||||||||||| Sbjct 448 ATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 406 Score = 109 bits (120), Expect = 4e-18 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| ||||| | || | || ||| || ||||||||| |||| ||| || Sbjct 170 CTCAGACGCAGTACCAAGTGCAAAGTCGATTCCTTCTGAATATTGTAGTCAGATAGTGTG 111 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||||||||| || ||||| |||||||| || ||||||||||| || ||||| || Sbjct 110 CGTCCATCTTCAAGCTGCTTTCCAGCAAAAATTAGCCTTTGCTGATCTGGGGGAATGCCC 51 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG 563416 |||||||| |||||||| || || ||||||||||||| Sbjct 50 TCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAG 8 >seq79385 Length=977 Score = 154 bits (170), Expect = 1e-31 Identities = 289/418 (69%), Gaps = 10/418 (2%) Strand=Plus/Minus Query 550160 AATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCG 550219 ||||| | ||||| |||||||||| |||||||||||||| | | ||| | ||| | Sbjct 911 AATCCAAATAATACAGTTTTTGATGCAAAACGTTTAATTGGCCGTAAATTTGAAGATCCC 852 Query 550220 ACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCT 550279 | |||| |||||| || |||||||| || ||| |||| || || || || Sbjct 851 AAAATTCAACAAGATATAAAACATTGGCCCTTTCAAGTTGTCTCTGACGGGGGGAAGCCA 792 Query 550280 TATATTGAAG-CTACTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCAT 550337 | || | || | ||| | ||||| | | || |||| |||||| ||||||||| Sbjct 791 AAAATAGTAGTCAACT-ACAAAGGAGAA-TCACGCAGATTTAGCCCAGAAGAAATTTCAT 734 Query 550338 CTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGG 550397 | |||||||| | |||||||||| ||| || | | | ||| | || | | Sbjct 733 CAATGGTTTTGACGAAAATGAAAGAAATCGCTGAAACGTACCTCGGTGGAATGGTAAAAG 674 Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 | ||||| |||| ||||||||||||||||||||| | ||||| || || || || || | Sbjct 673 ACGCAGTCGTAACCGTACCAGCATATTTTAATGACGCTCAACGCCAGGCCACGAAGGACG 614 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || |||||| | ||||||||| | | ||||| |||||||| || || || || | Sbjct 613 CCGGTGTTATTGCCGCACTTAATGTCTTGAGAATTATTAATGAACCAACAGCAGCAGCTC 554 Query 550518 TTGCATATGGACTTGATA---AACATAATGATCAAGAACTTAATGTACTCATCTTTGA 550572 | |||||||| | |||| ||| | | | || || ||||||||||| ||||| Sbjct 553 TCGCATATGGTTTAGATAGAGAACTGAGAGGTGAAAAA---AATGTACTCATTTTTGA 499 >seq38930 Length=2474 Score = 138 bits (152), Expect = 9e-27 Identities = 392/597 (66%), Gaps = 14/597 (2%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||| | || ||||||||| ||||||||||| |||||| ||||||| Sbjct 459 GCTATTGGAATTGATCTTGGCACCACATATTCCTGTGTTGGTGTGTGGCAACATGGTAAC 518 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| || |||||||| ||||||||| | || || || || || || |||| || Sbjct 519 GTGGAAATCATCGCCAATGACCAAGGTAACCGTACAACACCTTCATACGTCGCTTTTACT 578 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | || |||| ||||| || ||| |||| || || || | | | Sbjct 579 GACACCGAGCGCTTGATTGGCGATGCGGCGAAAAGCCAAGTGGCTTTGAACCCCAACCAC 638 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||| || || ||| | | || ||| | | ||| | || | |||| Sbjct 639 ACGGTTTTCGACGCGAAAAGGCTTATCGGACGCAAATTTGACGACGAAAAGATTCAACAG 698 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 |||||||| || ||||| || | | | |||| || || || || | || | | | Sbjct 699 GATATGAAACACTGGCCATTTAAGGTAATCAATGATTGCGGTAAGCCAAAAATCCAGGTT 758 Query 550292 --ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAAT-TTCATCTATGGTTTTA 550348 | ||| |||| || |||| |||| | || ||| | || || | |||||||| Sbjct 759 GAATTCA--AAGGTGAAGTCAAACGATTTGCCCCTGAAGAGATCAGCAGC-ATGGTTTTG 815 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 | || ||||| ||||||| || | | |||| | ||| || || || | Sbjct 816 ACAAAGATGAAGGAAACAGCAGAGGCATATCTTGGCACATCTGTTCGCGACGCCGTCGTC 875 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || || || || || || || || || || ||||||||| || Sbjct 876 ACAGTTCCCGCTTACTTCAACGATTCCCAGCGACAGGCAACGAAGGATGCTGGAGCCATA 935 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | || || || | || ||||| ||||| || ||||| || | ||||| || Sbjct 936 GCTGGCTTAAACGTCCTAAGAATCATCAACGAACCCACAGCTGCAGCTTTGGCATACGGC 995 Query 550529 CTTGATAAACAT----AATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 | ||||| || || | |||| |||||||| ||||| ||| |||||| Sbjct 996 TTGGATAAGAATTTAAAAGGCGAAAGA----AATGTACTAATCTTCGATCTTGGAGG 1048 >seq6747 Length=1699 Score = 129 bits (142), Expect = 5e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||||||||| | |||||||| ||||| |||||||||||| | | ||| | Sbjct 876 AGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCTGACAAAGTGCGA 935 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||| || || ||||| ||||| | ||||||||||| || || || ||| Sbjct 936 CCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCT 995 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||| ||||| ||||| |||||||| |||| | | ||| | ||| Sbjct 996 TTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAACGTA 1055 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| |||||||| |||||||| |||||||||||| Sbjct 1056 ATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCATA 1094 Score = 120 bits (132), Expect = 2e-21 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | ||| | ||||| ||| |||||| ||| ||||| || | ||||| | Sbjct 1332 AGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGG 1391 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| | ||| ||||| || || ||||| | ||||||||||| || || || ||| Sbjct 1392 CCGTCTTCCAATTGCTTTCCAGCGAAGATAAGACGCTGCTGATCAGGCGGGATGCCCTCT 1451 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || ||||| ||||| |||||| ||||| ||||||| | | | || ||| ||||| Sbjct 1452 TTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAG-GGTTCCACTTCCAGAGT 1510 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || || ||||| || |||||||| ||||| |||||| Sbjct 1511 AATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 1550 Score = 104 bits (114), Expect = 2e-16 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | ||| | ||| || ||| ||| || ||| || ||||||| ||| || | Sbjct 1104 AGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATGTTATAATCAGATAGTGTACGG 1163 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||||||||| |||||||| || ||||| || || || ||||| |||||| Sbjct 1164 CCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTTTGTTGGTCTGGGGGAATACCTTCT 1223 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || ||||| || ||| || || ||||| || || | || ||| || | || Sbjct 1224 TTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCCGATGGTTCTAC-CTCTAAGGT 1282 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| || |||||||| ||||| || || ||||| Sbjct 1283 GATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 1321 >seq298189 Length=499 Score = 123 bits (136), Expect = 2e-22 Identities = 125/160 (78%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| |||| |||||| | || ||||| || ||||| || |||| ||| |||| || Sbjct 238 AGCTGTAGGAATAGATCTTGGCACCACGTACTCCTGTGTAGGAGTTTTCCAACATGGAAA 297 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||||||||||||| || ||||| || ||||| || ||||| |||||| |||| | Sbjct 298 AGTTGAAATTATTGCCAACGACCAAGGAAATAGAACCACACCATCGTATGTTGCTTTTAA 357 Query 550111 GGAAACTGAAC-ATTTAGTTGGTGATGCAGCAAAATATCA 550149 || ||||||| | ||| | || |||||||| ||| |||| Sbjct 358 TGATACTGAACGACTTA-TCGGAGATGCAGCCAAAAATCA 396 >seq47401 Length=4725 Score = 114 bits (126), Expect = 1e-19 Identities = 261/393 (66%), Gaps = 0/393 (0%) Strand=Plus/Minus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| ||||| | || || | | || | ||| | |||||||| || || |||||| Sbjct 1718 GATGCCAAACGACTTATCGGTCGCAAATTCGAGGATGCTACTGTTCAAGCTGACATGAAG 1659 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAA 550300 || ||||| ||| || | || | || | || ||||| | ||| | | || | || Sbjct 1658 CACTGGCCATTCGAAGTGGTCAGTGATGGAGGCAAACCAAAGATTCAGGTATCTTACAAA 1599 Query 550301 GGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAA 550360 || | |||| || | || ||| || | || ||||| | | || ||||| Sbjct 1598 GGTGAAGATAAAACCTTCTTCCCTGAAGAAGTAAGCTCAATGGTGCTTACAAAGATGAAG 1539 Query 550361 CAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCA 550420 ||||||| || | | || || ||| | ||||||| || || || |||||| Sbjct 1538 GAAACAGCTGAGGCGTACCTCGGCAAAACAGTGCAGAATGCAGTCATCACGGTTCCAGCA 1479 Query 550421 TATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAAT 550480 ||||| | ||||| ||| | || || || |||||||| || || |||| || || Sbjct 1478 TATTTCAGCGACTCGCAAAGACAGGCCACAAAAGATGCAGGCACCATCTCTGGTCTGAAC 1419 Query 550481 GTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACAT 550540 ||||| || |||||||| ||||| ||||||||||| |||| || || ||||| || | Sbjct 1418 GTTCTCCGAATTATCAACGAACCCACTGCTGCTGCGATTGCGTACGGTCTTGACAAGAAG 1359 Query 550541 AATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 | | ||||| ||| || || || |||||| Sbjct 1358 GGCGCTGGAGAACGTAACGTCCTTATTTTTGAT 1326 >seq45218 Length=2383 Score = 111 bits (122), Expect = 1e-18 Identities = 189/271 (70%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||| | || ||| ||||||| ||||||| | | |||||||| |||| || ||| Sbjct 382 TTTGCTCCTGAAGAAATTTCGGCTATGGTCCTCACTAAAATGAAGGAAACCGCTGAAGCT 441 Query 550376 TTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCA 550435 | | |||| || | || || | || || | ||||||||||| || || || ||| | Sbjct 442 TATCTTGGCAAAAAGGTCACTCACGCTGTTGTCACTGTACCAGCCTACTTCAACGACGCT 501 Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495 ||||||||||| || || || ||||| ||| || || |||||||| | | || || Sbjct 502 CAACGTCAAGCCACCAAGGACGCTGGTGTTATCGCCGGTCTTAATGTGATGAGAATCATT 561 Query 550496 AATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTT 550555 || || |||||||||||||| | || || || ||||| || | | | | |||| Sbjct 562 AACGAGCCTACTGCTGCTGCTATCGCTTACGGTCTTGACAAGAAGGAAGGT-GAGAA--G 618 Query 550556 AATGTACTCATCTTTGATT---GTGGAGGTA 550583 ||||||||| | || |||| |||| |||| Sbjct 619 AATGTACTCGTTTTCGATTTGGGTGGTGGTA 649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4012768374281270