Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq94046 141 1e-28 seq110987 89.7 6e-13 >seq94046 Length=398 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| ||||||| || ||||||| |||| ||||| || || |||| |||||| ||||| Sbjct 141 ATCTCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 200 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 || ||||||||||| || ||||| ||||||| | |||||| || | | || | || Sbjct 201 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTC 260 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 | ||||| |||||||| || |||||| ||| |||||||| || | |||| ||| || Sbjct 261 CACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAAGGCTAAGACATGTTTGAT 320 Query 37619 AAAATGTCTTTCATCATTTGATAATTTTTTCCAATC 37654 ||||||| | || || | |||| | | |||||| Sbjct 321 AAAATGTTTCTCGCAATCTTTTAATGTCTCCCAATC 356 >seq110987 Length=1367 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 153288 GGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCT 153347 || || ||||||||||| || |||||||| ||| |||||| | ||||| || ||||| Sbjct 787 GGAGTGTTACATACAAAGTTCTGGATAGTCGATCGAAAACATTTCTATATCGGTAGTGCC 846 Query 153348 AATATGGATTGGAGATCACTAACTCAAGTAAA 153379 |||||||| ||||| ||||| ||||| ||||| Sbjct 847 AATATGGACTGGAGGTCACTCACTCAGGTAAA 878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590002892208920