Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq94046 120 6e-22 seq4665 98.7 2e-15 >seq94046 Length=398 Score = 120 bits (132), Expect = 6e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| || || ||||| || ||||| || || || || |||||| |||||| || Sbjct 171 GTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTC 230 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | ||| || || ||| ||||| | ||||| || |||||||| || || ||||| || Sbjct 231 AGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGA 290 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATG 48579 ||| ||||||||||| | ||||||||| | ||||| Sbjct 291 AGCCGCAAAGAAGGCTAAGACATGTTTGATAAAATG 326 >seq4665 Length=2873 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 ||| |||| |||||| |||||||||||| | |||||| || || |||||||| ||||| Sbjct 1425 CTTCAGCAGCTTCACCTTCTCCTCCAGCTTGGAGATGCGCTCGAGCTTGCGCCGCCGGCA 1484 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| ||| |||| ||||| || | | ||| || ||| |||||| | ||||| Sbjct 1485 CTTGGAGGCGGCCACTCGGTTGCGCTGCCGCTTGCGCTCCAGCTTGATCCTCTCCTGCGA 1544 Query 241609 CTCCATGTCGATCGGAGAC 241627 ||||||||||| || ||| Sbjct 1545 GTCCATGTCGATGGGCGAC 1563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927893732184320