Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq48588 219 5e-52 >seq48588 Length=2845 Score = 219 bits (242), Expect = 5e-52 Identities = 906/1414 (64%), Gaps = 45/1414 (3%) Strand=Plus/Minus Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 ||||| || || ||||| | ||| | ||| | || ||||| || || ||||||||||| Sbjct 2030 GGAAAGACCTCAACACATGCTTATGAGAGTCTCCATAGGCATTCATGGTGAAGACATTGA 1971 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAA 75323 | || | | || || | | |||||| | | ||| || | || |||| || | Sbjct 1970 TAGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTA 1912 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 | || ||| || | |||||| || || ||| | ||| |||||||||||| || | | Sbjct 1911 CACTGTTCTCAGCAGCTACACCGAGGCCACAGCTTTCCTCTTGCTTCCTTATAGCTATGA 1852 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443 | || || || | ||||| | || ||| | | | ||||| ||| || || | Sbjct 1851 AAGACGATAGTATTGAAGGTATTTTTGATACTTTAAAACAATGTGCATTAATTTCTAAAT 1792 Query 75444 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 75503 || || || || || | || | ||| | |||||| | ||| ||| | Sbjct 1791 CTGCCGGTGGCATAGGTTTACATACACATTGCATCAGAGCCCAGGGGTCTTATATAGCTG 1732 Query 75504 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563 | || ||||| ||| ||||| | | |||||| | | || | ||| || || Sbjct 1731 GTACTAATGGGGTTTCAAATGGTCTAGTGCCAATGTTGAGAGTGTACAACAATACTGCCA 1672 Query 75564 GCTATGTAAATCAAGCGGGG------CGTCGCAAGGGGTCCATC-GCGGTCTACTTGGAA 75616 | |||||| |||||| || |||| | ||| ||| || | ||||| || Sbjct 1671 GATATGTAGATCAAGGTGGAAACAAACGTCCC----GGTGCATTTGCAATTTACTTAGAG 1616 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 || |||||||| || || | |||||||| || ||| ||| |||| | ||||| Sbjct 1615 CCTTGGCATGCGGACATATTTGAGTTCCTAGATTTAAAGAAGAACACAGGTAAGGAAGAA 1556 Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 | ||||| || |||| || | ||||| ||||| || || ||||| | || Sbjct 1555 ATGAGAGCAAGAGAACTGTTTTATGCCTTATGGATACCAGATCTGTTTATGAAAAGAGTA 1496 Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 || ||| || | ||| ||| | ||||| | | || || ||| | ||| Sbjct 1495 GAAAAGGATGAAGATTGGAGTCTCATGTGTCCTCATGATTGTCCTGGCCTCGCTGACTGT 1436 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAG----GGTAGAGCCAA 75852 || ||||| ||||||| || || | || |||||||| || ||| | || Sbjct 1435 TATGGAGAGGAATTTGAAGAACTATATGCCAAATATGAAGAAGAAAAACGGTTTATAAAA 1376 Query 75853 TGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGG 75912 | | | ||| || | |||||| | ||| | || | || ||||||||| Sbjct 1375 CAAGTCAG----AGCTCAAGAGTTATGGAAGTCAATTATAGAAGCTCAAGTGGAGACTGG 1320 Query 75913 AACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGG 75972 |||||||||||| | || ||||||||||| |||| ||||||||| ||||| ||| | || Sbjct 1319 TACACCATATATGTTATATAAGGATGCTTGCAACAGGAAGAGTAATCAAAAAAATCTTGG 1260 Query 75973 AACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGAC 76032 || || || | ||||||||||| || || | | ||||| | ||||| Sbjct 1259 CACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGT 1200 Query 76033 GGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCAC 76092 ||| || ||||| | || || || || ||| |||| ||| |||| | | | | Sbjct 1199 GGCAGTGTGCAACCTTGCTTCCATAGCACTTAACAAGTTTGT---TGAAAATAAT---AG 1146 Query 76093 TTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152 ||| ||| | ||||| | | ||||||||||||||||| || ||||| ||||| ||| Sbjct 1145 ATTTAATTTTAAAAAATTAAAAGAAATCACAAAGATTGTGACTCAAAATTTAAACAAAGT 1086 Query 76153 CATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 |||||| || |||||||| || ||| || || || |||||| | ||| | Sbjct 1085 CATTGATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATGAGGCACCG 1029 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCAT 76268 |||||| ||| | |||||||| ||| | || ||| |||| | ||| || ||| | | Sbjct 1028 ACCTATCGGTATTGGTGTTCAGGGTATGGCAGATACATTTGTGTTGATGAGAATAC-CTT 970 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || || |||| | | ||| | || |||||||| || ||| | | Sbjct 969 ACGAAAGTGAGAAAGCAATACTCCTTAATCAACAAATATTTGAAACAATTTATTATGGTG 910 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | | || || ||||||||||| || ||| |||| | || |||| | | || Sbjct 909 CATTAGAAGCTAGTTGTGAATTAGCAGAAAAAGAAGGCGCATACAGCACATATCAAGGAA 850 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAAC-CAAGCTCAAC 76447 ||| || |||||| | || |||| |||||||||||| |||| | | | | Sbjct 849 GTCCAGCTAGCCAAGGTATCCTCCAGTATGATATGTGGGA---CAAAACTCCTACAGACC 793 Query 76448 TACG--ACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCT 76503 | | |||||| ||| ||||| ||| || ||| | | ||| | || || ||| Sbjct 792 TTTGGAACTGGGCTGTCCTCAAAGAAAAGATAGCAA--AACATGGTTTGCGCAATTCTCT 735 Query 76504 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563 ||||| ||||| |||||||| ||||| || |||||||| | || || | ||||| || Sbjct 734 ATTGATAGCACCTATGCCAACTGCCTCTACTGCACAAATTCTTGGCAACACTGAATCTTT 675 Query 76564 TGAACCATACACAACAAACATCTACCTGAGAAGA 76597 |||||||| ||| |||| || |||| |||||| Sbjct 674 TGAACCATTTACATCAAATATTTACCAAAGAAGA 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594239078486240