Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq10872 188 6e-43 seq6932 185 7e-42 seq287272 125 6e-24 seq115079 105 6e-18 seq4418 96.9 3e-15 seq6747 91.5 1e-13 seq47026 89.7 4e-13 >seq10872 Length=4330 Score = 188 bits (208), Expect = 6e-43 Identities = 134/154 (87%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 ||||||| | ||||||||||| |||| || ||||||||||||||||| |||||||||| Sbjct 2368 TGGCCGGCCTGCCAAGCGCCTTAGCGACCTCTGGCATGTTGACGATGACGGTCTTGATGC 2309 Query 34550 CGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609 |||| ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 2308 CGTTCCCCTTGCCCTCGACCTTAGCGCAGATGCGCGGCATCTTGTAGCGGTAGAACGCGT 2249 Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 ||||||| || | ||| ||||||| | |||||| Sbjct 2248 CCGCCACGTTCCTGTTCACGTTCAAGGACCCCAT 2215 Score = 111 bits (122), Expect = 1e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 || || | ||| || || ||||| ||||||| ||| ||||||||||||||| || ||| Sbjct 4115 CCGTCCAACAGATCTTGCAACTTGGCGGAGTCATGGCTGCCGTTGACGATGAAGCGCTCG 4056 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 || ||| | |||| ||||||||| ||||| |||||||| ||||||||||| || || Sbjct 4055 TTCTTGAAGTCGAACTGCGTTTGGGCGCCGAGCTCGCATCCGAAGTACTTAGTGGG 4000 >seq6932 Length=2340 Score = 185 bits (204), Expect = 7e-42 Identities = 580/891 (65%), Gaps = 17/891 (2%) Strand=Plus/Minus Query 28881 CATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGGGCTCAACGACGCCCTTAAA 28940 ||| || | || ||||| | || ||||||||||| || || | || ||| | | ||| Sbjct 1362 CATTTGCTCTATGGCTTTATTCCAATTTGCGGCGGTGATGGCATAAATGACAGCTTAAAA 1303 Query 28941 ACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTCGTGCAACGGCCGTTCAGATTTTAAA 29000 || || ||||| |||| ||||| || || || | ||||||| || || ||| Sbjct 1302 GAGATCGAAGGCAGTTTCCAAGCACTGCAGCGGTCCTGTAGCGGCCGTGAGGACTTCAAA 1243 Query 29001 GTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCAAAAGGGCGTGTCTGCGTGG 29060 || | || |||||||| ||||| ||| |||||||||| ||||| || ||||| ||||| Sbjct 1242 GTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCGTGG 1183 Query 29061 AACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATGGCTGCCAAGTTGGCCAATCCACAC 29120 |||||||||||||||||||| || || || | ||| | || ||| || | Sbjct 1182 AACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAA 1123 Query 29121 ATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCCGACCCTTT-TTATTTT--ATG 29177 | || ||||| || || || || || ||||| | |||| ||||| || |||| | Sbjct 1122 TTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTCGCCGATCCTTTCTTCTTTTTAGTT 1063 Query 29178 CACGACGCGGAGAAACGGCGCGTGTTTGTGGACTCGGTCGAGGAATTTTTGCAGGTGTGG 29237 || | | ||| | || |||||| | || || |||| ||| | | ||| Sbjct 1062 GACAAATCTAAGAGAACACG---ATTTGTGCAGTCAGTTAAGGAGTTTCTTCTAACATGG 1006 Query 29238 AAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGGCGGTAAAGGCGCTAACCCG 29297 ||||| ||||| || || || || || ||||| || || || |||||||| |||||||| Sbjct 1005 AAATTCTTTGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGTAAAGGTGCTAACCCT 946 Query 29298 ACACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACATTTTACTGAAGGAATTGCGC 29357 || || | | || || | || ||| | ||| |||| ||||| || Sbjct 945 GATCTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGATGAAAGAATTACGT 889 Query 29358 GCAATGCTGGATAAACTGCAATTGCAAACGGGTAAAACGTATGAATTGACAAGCGCAATC 29417 | ||||| ||| | || | | | ||||| | || ||||| || || || Sbjct 888 GAGATGCTCGATGAGCTCTCAGCTAAGAATGGTAAGAAATACGAATTAACTTCTGCTATT 829 Query 29418 AGCTCTGGCCACGACAAAATTGCTGTAGTGAAATACGACGTTGTGCAAAAATTTCTTGAT 29477 |||||||| || ||||| || || | |||| | | ||||| | | | ||| Sbjct 828 AGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAGGCTCAAAATTATATGGAT 769 Query 29478 AAAATATTTCTAATGAGTTACGATTTTAAAGGCGCATGGTCAAACACCGATTTGGGATAT 29537 | || || | |||||||| || || || || || |||||||| | | ||| || Sbjct 768 CATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTCAAATGATACTCTTGGACAT 709 Query 29538 CAAACTACACTCTACGCACCGAGTTGGAATCCCAACGAGCTTTACAACACTGACCACGCC 29597 ||||| || | ||||| || |||| |||||| || ||||| ||||| || Sbjct 708 CAAACACCATTGTACGCGCCTGCATGGAGTCCCAAGGAAACTTACACATCTGACTTCGGA 649 Query 29598 GTAAAGTCGCTCACTAAC-CAAGGCGTGGACCCGCGCAAAATTATTGTGGGCGTCGCCAT 29656 ||||| | || | | || || ||| | || || ||| | || || || ||||| Sbjct 648 GTAAAAT-ACTTGTTGGCACAGGGAGTGAATCCTAAGAAGATTGTAGTAGGTGTTGCCAT 590 Query 29657 GTACGGCCGCGGTTGGACGGGCGTGACCGGTTACGTCGGTGACAACTAT---TTTAAAGG 29713 ||| || || |||||||| ||||| | ||| || |||||| | || | ||| Sbjct 589 GTATGGTCGTGGTTGGACTGGCGTTCATGATTA---CGAAGACAACATTCCCTTCACAGG 533 Query 29714 CACAGCTGCCGGGCCCGTGACCGGCACTTGGGATGACGGAGTTGTCGACTA 29764 || ||| | || || || | || |||||| | |||||||| || || || Sbjct 532 CAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGTGGTTGATTA 482 >seq287272 Length=333 Score = 125 bits (138), Expect = 6e-24 Identities = 128/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 34201 GCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA 34260 || |||||||| |||||||||||||| || || ||||| ||| | | |||||||| Sbjct 85 GCGGGCGGGTTCTTCAGTATGAAGGTATTCAGTTTATGGTTGAACTCCAAAGTGCCGTGG 144 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCA 34320 || ||||| || |||||||| || ||||| ||||| | || | |||||| || ||||| Sbjct 145 TACCCGCACGCCTTGCAGCCTTGCGAGATAGTGTTCCTCTTGGTGGACACTATCAGCTCC 204 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367 ||||| || ||||| || || ||||| | || || |||||||| || Sbjct 205 GTCTCGGGATTGTCGCACTCGGGACAGAGGACGAATTTGCGGATAAA 251 >seq115079 Length=788 Score = 105 bits (116), Expect = 6e-18 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 33427 TCCTCGGCCTGCTGCAGCCAGTCCAGGAAGGGCTGCGCGCGGCGCCGCACGTCCGCCATC 33486 || ||||||||||||||||| || ||||||||||||||||| ||| ||||||| |||| | Sbjct 232 TCGTCGGCCTGCTGCAGCCACTCGAGGAAGGGCTGCGCGCGCCGCAGCACGTCGGCCACC 173 Query 33487 TCCTCGCGGCTTA-GCGC---TTTGCGGGACGGCTTGTAAAACCACTCCACGATCGCTTT 33542 |||| |||| |||| |||||| || |||||| ||| |||| | || Sbjct 172 ACCTC----CTTAGGCGCGTATTTGCGCGAGGGCTTGGCGGCCCAGTCCAGCACGGCGCG 117 Query 33543 CTTTTCCACCACGTTCAAGTCGTACAGCAGCTTGAACGCGCCGGCCACTTTGGGCAGCAG 33602 || ||||| | || || ||||| |||||||||| ||| ||| | ||| || || || Sbjct 116 CTCGTCCACGATGTCCAGATCGTAGAGCAGCTTGAGGGCGGCGGGGAGTTTCGGGAGGAG 57 Query 33603 CGCCTGGTCCAAAACGCACAGCGCGGTGAGCGCG 33636 || | || || ||||||||||| ||| Sbjct 56 GGCAGGCTCGGCGGCGGCGAGCGCGGTGAGTGCG 23 >seq4418 Length=3433 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || || ||||| | || |||||||| || || | ||| || || Sbjct 861 AATGCAAATTTTCGTGAAAACGCTGACTGGCAAAACTATCACATTGGAAGTAGAAGCTTC 920 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | || || || ||| |||||||||||| | ||| || || Sbjct 921 TGATACAATAGAAAATGTCAAGGCAAAAATTCAGGACAAAGAAGGCATTCCCCCAGACCA 980 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| ||| | |||| ||| ||||| || || || |||| |||||| | | |||||||| Sbjct 981 ACAGAGATTGATTTTTGCCGGTAAGCAACTTGAAGATGGAAGAACATTATCTGATTACAA 1040 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||||||||| | ||| | || | ||||| |||| || Sbjct 1041 TATTCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTCAGAGGTGG 1088 >seq6747 Length=1699 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || || | || || ||||| || || | || |||||| | Sbjct 637 ATGCAGATCTTTGTTAAGACACTTACTGGGAAAACTATCACTTTGGAGGTGGAGCCATCC 578 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | || || ||||| || || || ||| | ||| || ||| Sbjct 577 GACACTATCGAAAATGTTAAGGCAAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCAA 518 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| ||||||||| ||||||||| | | || || |||| |||||| Sbjct 517 CAGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTACAAC 458 Query 110453 ATTCAAAAAGAATCTACGTTGCA 110475 || |||||||||||||| ||||| Sbjct 457 ATCCAAAAAGAATCTACTTTGCA 435 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||| || ||| | || || |||||||| ||| | || || || Sbjct 1322 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCTTAGAGGTAGAACCATC 1263 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || ||| | | | || || ||||| ||||||||||| | ||| || || Sbjct 1262 GGACACTATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCA 1203 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||||| || |||| ||| || ||||| ||||| |||| | | ||| | | ||||| || Sbjct 1202 ACAAAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATAA 1143 Query 110452 CATTCAAAAAGAATCTAC 110469 ||||||||| |||||||| Sbjct 1142 CATTCAAAAGGAATCTAC 1125 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || || | || || ||||| || || | ||| ||| || Sbjct 865 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCATCA 806 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| | | | || ||| ||||| ||||| || || | ||| |||||| Sbjct 805 GACACTATTGAAAATGTTAAAGCCAAGATACAAGACAAGGAGGGTATTCCCCCAGATCAA 746 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || |||| ||| ||||| ||||||||||||| | || | | || ||||| Sbjct 745 CAACGTCTAATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAAT 686 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| || || |||||| |||| ||| | || |||| || Sbjct 685 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTCTAAGAGGAGG 639 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| ||||| |||| || || |||||||| | ||| ||| || Sbjct 1549 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 1490 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | |||||| || || |||||||| ||| | || ||||| Sbjct 1489 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCGCCTGATCAG 1430 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | ||||| | || || || || |||| || | | | || | | || |||||| Sbjct 1429 CAGCGTCTTATCTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTACAAC 1370 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||||||||||||||| | ||| |||| || | || || || |||| Sbjct 1369 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGAA 1321 >seq47026 Length=2159 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 103322 AACGGGTTCTACTATTTGGGCCGCAGCGACGAGGTGCGCTGCGCGTTTTGCAAAGTGGAA 103381 ||||| ||||| || |||||||| |||| || || |||||||||||||| ||||| ||| Sbjct 1959 AACGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 2018 Query 103382 ATCATGCGCTGGATGAATGGCGACGACCCGGAGAGCGACCATAAAAAGTGGGCGCCTCGA 103441 || ||| ||| | |||||||| || | | ||||| ||| ||||||||| | Sbjct 2019 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAAAGGTGGGCGCCCCAG 2078 Query 103442 TGCCCGTTTTTGCG 103455 ||||| || |||| Sbjct 2079 TGCCCCTTCCTGCG 2092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411269138337839