Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq211979 93.3 8e-14 >seq211979 Length=1174 Score = 93.3 bits (102), Expect = 8e-14 Identities = 107/143 (75%), Gaps = 6/143 (4%) Strand=Plus/Minus Query 182419 CAGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCTTCTGACAAAGAAGAATACGGT 182478 |||||||| ||||||||| | || || ||||||| |||||||| ||| | ||||| Sbjct 1060 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 1001 Query 182479 GCAAGAACTTTAAGAAAAAAGATATTTGATAAGTTATATGAATATATGACAGAATTTCCT 182538 || ||||| | ||||| || || | ||||||| |||||||| | |||||||||||| Sbjct 1000 GCGAGAACAATTAGAAATAAAATCAATTCTAAGTTAGATGAATATCTCACAGAATTTCCT 941 Query 182539 ---GTTATACGTAAACACCCATA 182558 ||||| |||||| || || Sbjct 940 CCAGTTAT---TAAACATCCTTA 921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899881990269280