Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq6747 109 4e-19 seq4418 89.7 4e-13 seq47026 87.8 1e-12 >seq6747 Length=1699 Score = 109 bits (120), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || |||||||| || | || || || ||||| ||| | || |||||| Sbjct 1322 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCTTAGAGGTAGAACCATC 1263 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || || ||| | ||||| ||| || ||||||||||| | ||| || || Sbjct 1262 GGACACTATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCA 1203 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 ||||||||| |||| ||| || |||||| | |||||| | | ||||| ||||| Sbjct 1202 ACAAAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTAT--CTGATTAT 1145 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||||| ||||| |||||||| ||||||||||||||| Sbjct 1144 AACATTCAAAAGGAATCTACTCTACATTTAGTATTG 1109 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct 1549 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 1490 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| ||||| |||||||| ||| | || |||||| Sbjct 1489 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCGCCTGATCAG 1430 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | ||||| | || || || ||||| ||||| ||| | ||| |||||| Sbjct 1429 CAGCGTCTTATCTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTACAAC 1370 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || |||||||||||||| || || || |||||| Sbjct 1369 ATTCAAAAAGAATCTACTCTTCACTTGGTATTG 1337 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 |||||||||||| | || ||||||||| | ||||||| |||||||| ||||||||| Sbjct 1684 GACAAAGAAGGCATTCCTCCAGATCAACAACGTCTTATTTTCGCGGGCAAGCAATTAGAA 1625 Query 106413 GAT--TCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTAT 106470 ||| || | ||| | || |||||||| |||||||||||||| | ||||||||| Sbjct 1624 GATGGTCGTACACTTT--CTGACTACAACATCCAAAAAGAATCTACTTTGCATTTAGTAC 1567 Query 106471 TGAGGTTACGAGGAGG 106486 | | ||| |||| || Sbjct 1566 TTCGTTTAAGAGGTGG 1551 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||||||| | ||||| || || ||||| | ||| ||| || Sbjct 1093 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACGTTAGAAGTTGAAGCCTCT 1034 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || ||||| |||||||| ||| | || |||||| Sbjct 1033 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 974 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | ||||| | ||| || || ||||| |||||| | ||| || |||||||| Sbjct 973 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCAGATTACAAT 914 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| || || || || || ||| | | | |||||||| Sbjct 913 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGG 867 >seq4418 Length=3433 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||| || ||||| |||||||||| || || || ||||| |||| | Sbjct 861 AATGCAAATTTTCGTGAAAACGCTGACTGGCAAAACTATCACATTGGAAGTAGAAGCTTC 920 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | || || ||||||| |||||||||||| | ||| || || Sbjct 921 TGATACAATAGAAAATGTCAAGGCAAAAATTCAGGACAAAGAAGGCATTCCCCCAGACCA 980 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| || | |||| ||| || || ||| | |||||| | ||| | |||||||| Sbjct 981 ACAGAGATTGATTTTTGCCGGTAAGCAACTTGAAGATGGAAGAACATTATCTGATTACAA 1040 Query 106439 CATACAAAAAGAATCTACACTACA 106462 || || ||||||||||| || || Sbjct 1041 TATTCAGAAAGAATCTACCCTTCA 1064 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| |||||| | || |||||||| ||||| | ||| || || Sbjct 633 AATGCAAATTTTTGTAAAAACACTTACAGGCAAGACTATTACTCTTGAAGTTGAGCCTTC 692 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || || ||||||| || || || || | ||| || || Sbjct 693 TGATACAATTGAAAATGTTAAGGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCA 752 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| |||||||||| ||| || |||||| | |||||| || || || ||||| Sbjct 753 ACAGAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAA 812 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTA 106469 || ||||| |||||||| | || |||||| Sbjct 813 TATTCAAAAGGAATCTACCTTGCACTTAGTA 843 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || ||| ||||||||||||| || || ||||| ||| | Sbjct 405 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTC 464 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | || || ||||||| ||||| ||||| | || || || Sbjct 465 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 524 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| || || |||| || |||||||| || |||||| ||| | ||||| || Sbjct 525 ACAGAGACTGATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACTCTATCTGATTATAA 584 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 || |||||||||||||| | || ||||| Sbjct 585 TATTCAAAAAGAATCTACTTTGCACTTAGT 614 >seq47026 Length=2159 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 99638 AACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAA 99697 ||||| || ||||| |||| |||| || ||||| |||||||||||||| ||||| ||| Sbjct 1959 AACGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 2018 Query 99698 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAA 99757 || ||| ||| | | ||||||||| || || || || || | |||||||| || Sbjct 2019 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAAAGGTGGGCGCCCCAG 2078 Query 99758 TGCCCGTTTATGCAGC 99773 ||||| || ||| || Sbjct 2079 TGCCCCTTCCTGCGGC 2094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 400797177221984