Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq39858 91.5 2e-12 >seq39858 Length=1503 Score = 91.5 bits (100), Expect = 2e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||| ||| | |||||||| ||||| || |||| ||| || | ||| | Sbjct 401 ATTTACAAAGTGTTGAAGCAGGTTCACCCGGATAC---TGGG--ATC-TCGAGTAAGGCT 348 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| || ||||| || ||||||||||| || |||| || |||| ||||||| Sbjct 347 ATGTCTATAATGAATTCCTTTGTCAACGATATTTTCGAACGTATCGCGGCCGAGGCGTCC 288 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| || ||||||| | |||||| || | || | ||||| |||| Sbjct 287 CGCCTGGCGCACTACAACAAGAGGTCAACGATCACGTCGAGGGAAGTGCAGACGTCCGTC 228 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || || || | | |||||| || || | ||||| ||| |||||| || Sbjct 227 CGTCTCCTCCTTCCCGGCGAGCTCGCGAAACACGCGGTCAGCGAGGGAAC 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7147667782232726