Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq48588 113 6e-20 >seq48588 Length=2845 Score = 113 bits (124), Expect = 6e-20 Identities = 464/722 (64%), Gaps = 30/722 (4%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||| | || |||| ||||| | ||| |||| || | ||||| || || ||| Sbjct 651 TAAATATTTGATGTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 710 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTC 118300 || || ||||| ||||| || | || || || | ||| | ||| ||| | ||| Sbjct 711 GCAGTTGGCATAGGTGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTA-TCTTTTC 769 Query 118301 CTTGAG---AGC---GTCCCA---GTC-GTAGTTGAGCTTTGTCTCCCCCTGCCACATAT 118350 ||||| ||| || ||| ||| |||| ||| |||||| |||||||| Sbjct 770 TTTGAGGACAGCCCAGTTCCAAAGGTCTGTAG--GAGTTTTGTC--------CCACATAT 819 Query 118351 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 118410 || ||||||||||||||||| ||||| ||| | | |||| |||| ||| || Sbjct 820 CATACTGGAGGATACCTTGGCTAGCTGGACTTCCTTGATATGTGCTGTATGCGCCTTCTT 879 Query 118411 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAG 118470 || || ||||| | || || || | || | | ||| ||||||||||| || | Sbjct 880 TTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTT 939 Query 118471 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 118530 ||| | | || | || || | | | || ||| | |||| ||| | Sbjct 940 GATTAAGGAGTATTGCTTTCTCACTTTCGTAAGGTATTCTCATCAACACAAATGTATCTG 999 Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590 | | ||| || ||||| | || || || || || |||||||| || | || Sbjct 1000 CCATACCCTGAACACCAATACCGATAGGTCGGTGCCTCATATTTGAAGTTTTTGCTTCAG 1059 Query 118591 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650 || |||||||| || ||| || || | |||| ||||| || |||| |||||||| Sbjct 1060 GGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAATCTTTGTGA 1119 Query 118651 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 118710 |||| | | |||| ||| ||| || | | | |||| ||| |||| ||| | Sbjct 1120 TTTCTTTTAATTTTTTAAAATTAAATCT---ATTATTTTCA---ACAAACTTGTTAAGTG 1173 Query 118711 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 118770 | || || || || || ||||| | ||||| | |||||| | | || || | Sbjct 1174 CTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAG 1233 Query 118771 TGCACAAGTTTG-AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 |||| ||| ||| || ||||| ||||| | || |||||||| ||| |||| || Sbjct 1234 TGCA-AAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAA 1292 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 |||||||| || | ||| ||||| || || |||||| ||| | | | ||| | |||| Sbjct 1293 GCATCCTTATATAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATTGACTTC 1352 Query 118890 CA 118891 || Sbjct 1353 CA 1354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 616019259699880