Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq48588 132 6e-26 >seq48588 Length=2845 Score = 132 bits (146), Expect = 6e-26 Identities = 665/1049 (63%), Gaps = 23/1049 (2%) Strand=Plus/Minus Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274 ||||| || || ||||| | ||| | || |||| || |||||||| ||||||||||| Sbjct 2030 GGAAAGACCTCAACACATGCTTATGAGAGTCTCCATAGGCATTCATGGTGAAGACATTGA 1971 Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAA 104333 | || | | || || | | |||||| | | ||| || | || |||| || | Sbjct 1970 TAGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTA 1912 Query 104334 CCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACA 104393 | || ||| || | |||||| || || || | ||| |||||||||||| || | | Sbjct 1911 CACTGTTCTCAGCAGCTACACCGAGGCCACAGCTTTCCTCTTGCTTCCTTATAGCTATGA 1852 Query 104394 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 104453 | || || || | ||||| | || ||| | | | ||||| ||| || || | Sbjct 1851 AAGACGATAGTATTGAAGGTATTTTTGATACTTTAAAACAATGTGCATTAATTTCTAAAT 1792 Query 104454 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513 || || || || || | || | ||| | |||||| | ||| ||| | Sbjct 1791 CTGCCGGTGGCATAGGTTTACATACACATTGCATCAGAGCCCAGGGGTCTTATATAGCTG 1732 Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573 | || ||||| ||| ||||| | | |||||| | | || | ||| || || Sbjct 1731 GTACTAATGGGGTTTCAAATGGTCTAGTGCCAATGTTGAGAGTGTACAACAATACTGCCA 1672 Query 104574 GCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCA 104629 | |||||| |||||| ||| | || | || | | ||| | || | ||||| Sbjct 1671 GATATGTAGATCAAGGTGGAAA-CAAACGTCCCGGTGCATTTGCAATTTACTTAGAGCCT 1613 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 ||||| ||||| || | |||||||| || || ||| |||| | || || | Sbjct 1612 TGGCATGCGGACATATTTGAGTTCCTAGATTTAAAGAAGAACACAGGTAAGGAAGAAATG 1553 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 | | || || || | || | ||||| |||||||| || ||||| ||||| || Sbjct 1552 AGAGCAAGAGAACTGTTTTATGCCTTATGGATACCAGATCTGTTTATGAAAAGAGTAGAA 1493 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGT 104808 || || ||||| |||| | ||||| | | ||||| ||| | || || | Sbjct 1492 AAGGATGAAGATTGGAGTCTCATGTGTCCTCATGATTGTCCTGGCCTCGCTGACTGTTAT 1433 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC 104868 || ||||| ||||||| || || | || || || |||||| ||| | | || Sbjct 1432 GGA-GAGGAATTTGAAGAACTATATGCCAAATATGAAGAAGAAAAACGGTTTA-TAAAAC 1375 Query 104869 G-GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927 || |||| || | ||||| | ||| | | ||||| ||||||||||||| Sbjct 1374 AAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCTCAAGTGGAGACTGGTACAC 1315 Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987 |||| ||| | || || || || || ||| |||||||||||||| ||| | || | Sbjct 1314 CATATATGTTATATAAGGATGCTTGCAACAGGAAGAGTAATCAAAAAAATCTTGGCACTA 1255 Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047 | || || |||||| || || || | || ||| || ||||||| ||| | Sbjct 1254 TTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAG 1195 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 105107 |||| ||||| || || || || || ||||| ||| || | || | |||| Sbjct 1194 TGTGCAACCTTGCTTCCATAGCACTTAACAAGTTTGT------TGAAAATAATAGATTTA 1141 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 ||| | ||||| | | ||| | || || | ||| || |||| |||||| ||| |||| Sbjct 1140 ATTTTAAAAAATTAAAAGAAATCACAAAGATTGTGACTCAAAATTTAAACAAAGTCATTG 1081 Query 105168 ATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224 || || ||||| || || ||| || | || |||||||| ||||| || | Sbjct 1080 ATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATGAGGCACCGACCTA 1024 Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGAT 105253 | ||| | |||||||||||| | || ||| Sbjct 1023 TCGGTATTGGTGTTCAGGGTATGGCAGAT 995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580982269812520