Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq21542 141 1e-28 seq147219 95.1 1e-14 >seq21542 Length=1513 Score = 141 bits (156), Expect = 1e-28 Identities = 202/281 (72%), Gaps = 9/281 (3%) Strand=Plus/Minus Query 124494 AACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAATCGACTGC 124553 ||||| || | |||||||| ||| |||||| | | |||||| || ||||| |||| Sbjct 882 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCCACCACGAAGTCCTCGGGCGCGTCCTGC 823 Query 124554 TGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGCA 124613 || | ||| ||||||||||| | || ||||| ||||| |||||||| |||||| Sbjct 822 TGTAGCATGAGCCACATGGCCTCCACATAGTCGCGCGCGTGGCCCCAGTCACGCTTGCTG 763 Query 124614 TCCAGGTTTCCGAGCTCGA--TTGGCTTGGCCGTCTTGTTCCA-CTCCGCCAAACCCAGT 124670 || ||||| |||||||||| | | | | | | | | | || || | ||| | Sbjct 762 TCGAGGTTGCCGAGCTCGAGGTGCGATAAGAGGCCAAGGTGTATCTTGGCGACGCCCCGG 703 Query 124671 GTAATCTTGCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACAGA 124727 || |||||||||||||| || |||| ||||| ||| ||||||||||||||| Sbjct 702 GTGATCTTGCGCGTCACGAAGTTCTCG---CCGCGGCGCGGGCTCTCGTGGTTGAACAGT 646 Query 124728 ATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTT 124768 | || | ||||||||||| ||||||| |||||||||||| Sbjct 645 AGCCCGTTGCACGCAAACATGCCGTACGCCTCGCGGTAGTT 605 Score = 122 bits (134), Expect = 9e-23 Identities = 212/308 (69%), Gaps = 9/308 (3%) Strand=Plus/Minus Query 158944 AACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGT 159003 |||||||| | |||||||| ||| || || || | ||| |||||||| || || ||| Sbjct 882 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCCACCACGAAGTCCTCGGGCGCGTCCTGC 823 Query 159004 TGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCA 159063 || |||||||||||||||||||| || || || ||||||| |||||||| |||||| Sbjct 822 TGTAGCATGAGCCACATGGCCTCCACATAGTCGCGCGCGTGGCCCCAGTCACGCTTGCTG 763 Query 159064 TCCATGTTCCCGAGCTCGATG------ACTTTTCCAGACTTTTTCCACTCAGCCAGACCG 159117 || | ||| |||||||||| | | ||| | | | || || | || Sbjct 762 TCGAGGTTGCCGAGCTCGAGGTGCGATAAGAGGCCAAGGTGTAT---CTTGGCGACGCCC 706 Query 159118 AGCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAACAGA 159177 | ||||||||||||||||| || | | ||||| || ||| ||||| ||||| Sbjct 705 CGGGTGATCTTGCGCGTCACGAAGTTCTCGCCGCGGCGCGGGCTCTCGTGGTTGAACAGT 646 Query 159178 ATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTATCCA 159237 | ||| | || || |||| | || | ||||||||| || ||||||||| || Sbjct 645 AGCCCGTTGCACGCAAACATGCCGTACGCCTCGCGGTAGTTCACCACTATCCAGTAGCCG 586 Query 159238 AAGAGCTT 159245 | ||||| Sbjct 585 TATAGCTT 578 >seq147219 Length=658 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| |||||||| | ||| |||||||| ||||| || | || || ||||| || || Sbjct 289 GTGAATATGTAACGGGGGCTCGCAGCATCTTTGCCCCCGGACAGGCGGGTACCAAACTGA 230 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 |||| || ||||| ||||| | |||||| | ||||| |||||||||||| || ||| Sbjct 229 CCACGGGGTTCCAACAGGTTAATGTTGTTTGACCCCACGTAGTTTTGAGCCAGATTCACA 170 Query 117425 ATCGT 117429 || || Sbjct 169 ATTGT 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545078280175400