Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq48588 558 5e-154 seq111536 111 2e-19 seq289356 96.9 5e-15 seq94045 95.1 2e-14 seq296465 91.5 2e-13 >seq48588 Length=2845 Score = 558 bits (618), Expect = 5e-154 Identities = 1024/1493 (69%), Gaps = 13/1493 (1%) Strand=Plus/Plus Query 76764 ATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAG 76823 |||||| || || | ||||||||||| | | | ||| |||||||| |||| ||| Sbjct 255 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 314 Query 76824 TACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAA 76883 ||||| || ||||||| ||||| |||| ||| |||||| || || ||||| | Sbjct 315 TACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 374 Query 76884 TAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 76943 || |||| | || | ||| || || | || |||||||| || || || ||||||||| Sbjct 375 TAGTTAGGTTTAGCAACATGTATGTTGAAAGATTGACTTTGGTCTATAAACGCTCCTCTA 434 Query 76944 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 77003 ||||| ||||| | ||| || || | | ||| ||||| | |||||| | | | | Sbjct 435 TCAGCGGCCATCTGTATGGACGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 494 Query 77004 TTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAACCACCATCTGATATAATTGTA 77060 | || || | || | ||| | ||| | || || ||| | ||||||| | Sbjct 495 CTTATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGA 554 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 || || ||||| |||| ||| || | | || ||| | | || |||||| | || Sbjct 555 TTTTTCATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTC 614 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 |||| ||||||||||||| || ||||| | ||||||||| ||| ||||||| Sbjct 615 ACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTTCA 674 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | ||||||| |||| || | |||||| |||||||| ||||||||||||||||| | |||| Sbjct 675 AAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTTGGCATAGGTGCTATCAAT 734 Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 | | ||| | | ||||||| || || || ||||| || ||| | |||||| Sbjct 735 AGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCAAAGG 794 Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360 |||| ||| ||||| | ||| || || || || || | ||||| ||| Sbjct 795 TCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTTCCT 854 Query 77361 TTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCG 77420 | |||||| || | |||||| |||| |||| ||||||||| ||||| ||||| || Sbjct 855 TGATATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCA 914 Query 77421 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGA 77480 |||||||||||||| || || | | ||| || | ||||| ||| || | || Sbjct 915 TAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGG- 973 Query 77481 TAATGT-AAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATG 77539 || | | | | | ||| | |||||| | |||||||| |||||||| ||||||| || Sbjct 974 TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGTCGGTG 1033 Query 77540 TCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATT 77599 ||| |||| ||| |||| ||||| || | ||||||| | |||| || || | ||| || Sbjct 1034 CCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTT 1093 Query 77600 GAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC 77659 | |||| | || | || | || |||| ||| ||||| |||||| || Sbjct 1094 TAAATTTTGAGTCACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTATTATT 1153 Query 77660 TATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTT 77719 | ||||||| |||| | ||||| || || || || || ||||| || |||| | Sbjct 1154 TTCAACAAACTTGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGA 1213 Query 77720 GGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTG 77779 | ||||| | | ||| || || ||||| |||||||| |||||||| ||||||| ||| Sbjct 1214 AGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTG 1273 Query 77780 GTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTG 77839 || ||||| | ||||| | |||||||| | ||| | || || || || || | || Sbjct 1274 ATTACTCTTCCTGTTGCAAGCATCCTTATATAACATATATGGTGTACCAGTCTCCACTTG 1333 Query 77840 TGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGT--ATCGCC 77895 | ||| ||||| || ||||| | ||||| |||| | | | | ||| | | || Sbjct 1334 AGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGA--CTTGTTTTATAAACCGTT 1389 Query 77896 TCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATC 77955 | ||| |||||||| | |||||| ||||||||| ||||| || ||| | | | Sbjct 1390 TTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCATAACAGTCAGCGAGGC 1449 Query 77956 CAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAA 78015 |||| || |||| || ||||| | ||| || |||| | | |||| |||||||| Sbjct 1450 CAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACTCTTTTCATAA 1509 Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTG 78075 | ||||| |||||||||| ||| ||| || |||| | ||| |||||| || |||| Sbjct 1510 ACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTTGCTCTCATTTCTTCCTTACCTG 1569 Query 78076 TATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTG 78135 | ||||| || | ||| || ||||| | || || | |||||| || |||| || |||| Sbjct 1570 TGTTCTTCTTTAAATCTAGGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAATTG 1629 Query 78136 CCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAA 78195 | | | || || ||||| || || || ||||||| ||||||||| || || || || | Sbjct 1630 CAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGTACA 1689 Query 78196 CTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 ||||||||||||| | | ||| || || ||||| || |||| |||||| Sbjct 1690 CTCTCAACATTGGCACTAGACCATTTGAAACCCCATTAGTACCAGCTATATAA 1742 Score = 114 bits (126), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 |||||| ||||| || ||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 2253 CTTATTGTTTATCTTTAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 2312 Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652 | ||| ||||| || |||| ||| |||| | || ||| || |||| ||| Sbjct 2313 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 2363 >seq111536 Length=3730 Score = 111 bits (122), Expect = 2e-19 Identities = 245/367 (67%), Gaps = 3/367 (1%) Strand=Plus/Plus Query 170967 TTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTA 171026 |||||| ||| || || |||||||| ||| | || | || ||| | | ||| | | Sbjct 2907 TTATGACTCCAGTATTACCGATGTTAGCTGAAGCTTGCAAGTCGGTTGAAATGGCTATGA 2966 Query 171027 AAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTC 171086 |||||| |||| ||| |||||| | || ||||||||||||| ||||| || ||||||| Sbjct 2967 AAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGTTC 3026 Query 171087 ATAAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACATA 171146 ||||||| ||| | || | ||| | | | | |||||||| | | || | Sbjct 3027 ATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCACA 3086 Query 171147 AAGTTGATTATCTCAAGGAATACCTTCCTAAAGCATTTAAAAAAGCTACCTCTATTATCT 171206 ||||| | || | || || || | |||||||||||| |||| | | | || | Sbjct 3087 AAGTTAGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGCTGATTTGATTT 3146 Query 171207 TGGATTCCGAAATTGTTCTAGTTGATGAACATAATG---TTCCACTTCCGTTTGGAAGTC 171263 ||||| | ||| | || | ||||||| ||| || ||| | || ||||| | Sbjct 3147 TGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTTGGTACAT 3206 Query 171264 TAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTTGATT 171323 |||| || |||||| | ||| | ||| ||||| | | ||||| | | ||||||| Sbjct 3207 TAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGTTTATATATATTTGATT 3266 Query 171324 GTTTATA 171330 | ||||| Sbjct 3267 GCTTATA 3273 >seq289356 Length=614 Score = 96.9 bits (106), Expect = 5e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 78753 ttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 || || || || || |||| ||| |||| |||||||| ||||| | ||| ||||||||| Sbjct 511 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 452 Query 78813 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTT 78872 ||||| | |||||| ||| ||||| ||||| || |||| | |||| | ||| |||| Sbjct 451 GGATGATCTGTAGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 392 Query 78873 GTGACCCCATTATATA 78888 || || ||| ||||| Sbjct 391 GTTACACCAGAATATA 376 >seq94045 Length=338 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || |||| ||||||||||| || |||||||| ||||| || |||||||||||||| | | Sbjct 307 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 248 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 ||||| || |||||||||||||| ||||| || Sbjct 247 CATATGTCCGGATATTGGATTGGGAATATAACGAA 213 >seq296465 Length=573 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 48142 ATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGAC 48201 || |||||| || | | |||| |||| ||| ||| | ||| || || || | | Sbjct 106 ATACAAAATTACTAAACATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATC 164 Query 48202 CGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT-CCAGAAAAGAAT 48260 ||||||| || || |||||||| | ||||||||||| || |||| | || || || ||| Sbjct 165 CGGGCATCAGCCCTCGTTTTTTCAACCAAAATATTGAAGC-AAAGCTGCCTGAGAAAAAT 223 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC---TTCGTTGTGT 48317 || || || || |||||||| ||| ||| | ||||| | |||| | | || Sbjct 224 ATTCCCTCAACCGCCGCAAAAGCGATAATACGTTCTCCAAATATGGCAGTCTTGCTGCCG 283 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 |||||| || ||||| || ||||||||||| | ||| || | || || || ||||| Sbjct 284 ATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTG 343 Query 48378 AA 48379 || Sbjct 344 AA 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691955050282720