Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq48588 562 4e-155 seq111536 95.1 2e-14 seq94045 86.0 9e-12 >seq48588 Length=2845 Score = 562 bits (622), Expect = 4e-155 Identities = 1097/1609 (68%), Gaps = 19/1609 (1%) Strand=Plus/Plus Query 75359 ATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAG 75418 |||||| || || | || |||||||| | | | |||||||||||| |||| ||| Sbjct 255 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 314 Query 75419 TACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAA 75478 ||||| || ||||||| ||||| |||| ||| |||||| || |||||||| | Sbjct 315 TACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 374 Query 75479 TAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 75538 || | || | || | ||| || || | || |||||||| || || || ||||||||| Sbjct 375 TAGTTAGGTTTAGCAACATGTATGTTGAAAGATTGACTTTGGTCTATAAACGCTCCTCTA 434 Query 75539 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 75598 ||||| ||||| | ||| || || | | ||| ||||| | |||||| | | | | Sbjct 435 TCAGCGGCCATCTGTATGGACGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 494 Query 75599 TTGATATCATCTGGAAGATTTGT---ATTT--TGAATGGATCCGCCATCAGATATAATTG 75653 | || || | || ||||| | |||| || || ||||| | ||||||| Sbjct 495 CTTATTTCTTTAGG--GATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 552 Query 75654 TATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGAT 75713 ||| || || || |||| ||| || | | || ||| | | || |||||| | | Sbjct 553 GATTTTTCATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 612 Query 75714 TAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTT 75773 | || | ||||||||||||| || ||||||| ||||||||| ||| |||||| Sbjct 613 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTT 672 Query 75774 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCA 75833 | | ||||||| |||| || | |||||| ||||| || ||||| ||||||||||| | || Sbjct 673 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTTGGCATAGGTGCTATCA 732 Query 75834 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 75893 ||| | ||| | | ||||||| || || || ||||| || ||| | ||||| Sbjct 733 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCAAA 792 Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953 | |||| || ||||| | ||| || || || || || | |||||| || Sbjct 793 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTTC 852 Query 75954 CATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCAC 76013 | | |||||| ||| | || || ||||| |||| ||| ||||| || ||||| |||| Sbjct 853 CTTGATATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCAC 912 Query 76014 CGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAG 76073 | |||||||||||||| || || | | |||||| | |||| ||| || ||| Sbjct 913 CATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAG 972 Query 76074 GATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTA 76132 | || | | | | | ||||| |||||| | |||||||| |||||||| ||||||| Sbjct 973 G-TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGTCGG 1031 Query 76133 TGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTA 76192 || ||| |||| ||| ||| ||||| || | ||| ||| | |||| ||| || | ||| Sbjct 1032 TGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTG 1091 Query 76193 TTGAGATTTCTGACA-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCC 76251 || | |||| ||| || | || | || |||| ||| ||||| |||| | Sbjct 1092 TTTAAATTT-TGAGTCACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTATT 1150 Query 76252 ATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGC 76311 || | |||||| | ||||| ||||| || || || || || || || || |||| | Sbjct 1151 ATTTTCAACAAACTTGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTC 1210 Query 76312 ATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTG 76371 | ||||| | | ||| ||||| ||||| ||||| || ||||| |||||||||| Sbjct 1211 TGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTT 1270 Query 76372 TTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAAT 76431 ||| || ||||| |||| || | |||||||| | | | | || || ||||| || | Sbjct 1271 TTGATTACTCTTCCTGTTGCAAGCATCCTTATATAACATATATGGTGTACCAGTCTCCAC 1330 Query 76432 CTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTAT--C 76487 || | ||| ||||| || ||||| | ||||| |||| | | | | ||| || | Sbjct 1331 TTGAGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGACTT--GTTTTATAAACC 1386 Query 76488 GCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCA 76547 | || ||| |||||||| | ||||| ||||||||| ||||| || ||| | | Sbjct 1387 GTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCATAACAGTCAGCGA 1446 Query 76548 AACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCA 76607 |||||||| |||| |||||||| | ||| || |||| | | || | ||||| Sbjct 1447 GGCCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACTCTTTTCA 1506 Query 76608 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTC 76667 |||| ||||| |||||||||| ||| ||| || |||| | ||| |||||| || | Sbjct 1507 TAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTTGCTCTCATTTCTTCCTTAC 1566 Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727 |||| ||||| || | |||||||||||| | || || | |||||| || |||| || | Sbjct 1567 CTGTGTTCTTCTTTAAATCTAGGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAA 1626 Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787 | || | |||| || ||||| || || || ||||||| |||||||||||| || || | Sbjct 1627 TTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGT 1686 Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTC 76847 | |||||||||||||| | | || || || ||||| || |||| |||||| | Sbjct 1687 ACACTCTCAACATTGGCACTAGACCATTTGAAACCCCATTAGTACCAGCTATATAAGACC 1746 Query 76848 CACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907 | || | || | || || ||||| || || || |||||| |||| | Sbjct 1747 CCTGGGCTCTGATGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAATTAATG 1806 Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956 |||| |||| || || ||| | || || || |||||||| || |||| Sbjct 1807 CACATTGTTTTAAAGTATCAAAAATACCTTCAATACTATCGTCTTTCAT 1855 Score = 114 bits (126), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 |||||| ||||| || ||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 2253 CTTATTGTTTATCTTTAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 2312 Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247 | ||| ||||| || |||| ||| | || | || ||||||||| | ||| Sbjct 2313 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 2363 >seq111536 Length=3730 Score = 95.1 bits (104), Expect = 2e-14 Identities = 245/369 (66%), Gaps = 7/369 (2%) Strand=Plus/Plus Query 169535 TTATGACTCC--TATCAATCCTATGTTGGCCGAATCATGCGATTCTGTTAACAAGGCATT 169592 |||||||||| ||| | || ||||| || ||| | ||| | || ||| | | ||| | Sbjct 2907 TTATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAGTCGGTTGAAATGGCTAT 2964 Query 169593 TAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGCAAGT 169652 ||||||| |||| ||| |||||| | || | |||||||| || ||||| || ||||| Sbjct 2965 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 3024 Query 169653 TCATAAAAATAATAACAACTTTGCCTTCTTTAGTAGAAATATGAAACCAGTTTTACCACA 169712 ||||||||| || | || | ||| | | |||||||| | | || Sbjct 3025 TCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 3084 Query 169713 TAAAGTTGATTATCTCAAAGAATACCTTCCTAAAGCATTTAAAAAAGCTACGTCTATTAT 169772 |||||| | || | ||||| || | |||||||||||| |||| | | | || Sbjct 3085 CAAAGTTAGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGCTGATTTGAT 3144 Query 169773 CTTGGATTCTGAAATTGTTCTAGTTGACG--AACAC-AATATACCACTTCCGTTTGGAAG 169829 |||||| ||||| | || | ||||| | || || | |||| | || ||||| | Sbjct 3145 TTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTTGGTAC 3204 Query 169830 TTTAGGAATACACAAAAAGAAAGAATATAAAAACTCTAATATGTGTTTGTTCGTCTTTGA 169889 ||||| || |||||| | ||||| |||| | || | | ||||| | | ||||| Sbjct 3205 ATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGTTTATATATATTTGA 3264 Query 169890 TTGTCTATA 169898 ||| |||| Sbjct 3265 TTGCTTATA 3273 >seq94045 Length=338 Score = 86.0 bits (94), Expect = 9e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175 || |||| ||||||||||| || ||||| || || || || |||||||||||||| | | Sbjct 307 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 248 Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAA 47210 ||||| || |||||||||| || || ||||| || Sbjct 247 CATATGTCCGGATATTGGATTGGGAATATAACGAA 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710149295031360