Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq235879 690 0.0 seq237002 666 0.0 seq237313 600 4e-167 seq237567 491 1e-134 seq236944 489 5e-134 seq234085 480 3e-131 seq237382 468 2e-127 seq235925 206 8e-49 >seq235879 Length=423 Score = 690 bits (764), Expect = 0.0 Identities = 403/423 (95%), Gaps = 0/423 (0%) Strand=Plus/Minus Query 26080 CATACAACCAATAAATGCTGAAATGAATTCTAAGCGGAGATCGCCTAGTGATTTTAAACT 26139 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 CATGCAACCAATAAATGCTGAAATGAATTCTAAGCGGAGATCGCCTAGTGATTTTAAACT 364 Query 26140 ATTGCTGGCAGCATTCTTGAGTCCAATATAAAAGTATTGTGTACCTTTTGCTGGGTCAGG 26199 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 363 ATTGCTGGCAGCATTCTTGAGTCCAATATAAAAGTATTGTGTGCCTTTTGCTGGGTCAGG 304 Query 26200 TTGTTCTTTAGGAGGAGTAAAAGGATCAAATGCACTAAACGAAACTGAAACAAGCGATCG 26259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 TTGTTCTTTAGGAGGAGTAAAAGGATCAAATGCACTAAACGAAACTGAAACAAGCGATCG 244 Query 26260 AAAATATCCCTTTGGGATTCTTGACTCGATAAGTCTATTATTTTCAGAGAAAAAATATTC 26319 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 AAAATATCCCTTTGGGATTCTTGACTCGATAAGTCTATTATTTTCNNNNNNNNNNNNNNN 184 Query 26320 ATTGTTTTCTGGGTTGGTGATTGCACCAATCATTCCATTCAAAATTGTTGTTTTACCACA 26379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 NNNGTTTTCTGGGTTGGTGATTGCACCAATCATTCCATTCAAAATTGTTGTTTTACCACA 124 Query 26380 CCCATTCCGCCCGATAAAAGCATGAATGTTCGTGCTGGGCATAGAATTAACCGTCACCTC 26439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 CCCATTCCGCCCGATAAAAGCATGAATGTTCGTGCTGGGCATAGAATTAACCGTCACCTC 64 Query 26440 AAAAGGTATAGTTAAATCACTGAATCCGGGAGCACTTTTTCTATTAAATGAAAAGTGGAA 26499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 AAAAGGTATAGTTAAATCACTGAATCCGGGAGCACTTTTTCTATTAAATGAAAAGTGGAA 4 Query 26500 ATC 26502 ||| Sbjct 3 ATC 1 >seq237002 Length=369 Score = 666 bits (738), Expect = 0.0 Identities = 369/369 (100%), Gaps = 0/369 (0%) Strand=Plus/Minus Query 46999 CCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTT 47058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 369 CCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTT 310 Query 47059 GTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATC 47118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 309 GTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATC 250 Query 47119 TTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCC 47178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 249 TTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCC 190 Query 47179 TGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGAT 47238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 189 TGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGAT 130 Query 47239 GCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAACACGGTGT 47298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129 GCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAACACGGTGT 70 Query 47299 TATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGA 47358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 69 TATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGA 10 Query 47359 CGTTGTGAC 47367 ||||||||| Sbjct 9 CGTTGTGAC 1 >seq237313 Length=339 Score = 600 bits (664), Expect = 4e-167 Identities = 335/337 (99%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 45881 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCGG 45940 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 45941 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 46000 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 46001 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 46060 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 46061 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 46120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 46121 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 46180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 46181 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGAT 46217 ||||||||||||||||||||||||||||||||||||| Sbjct 301 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGAT 337 >seq237567 Length=272 Score = 491 bits (544), Expect = 1e-134 Identities = 272/272 (100%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 45002 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 45061 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60 Query 45062 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 45121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120 Query 45122 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 45181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 180 Query 45182 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 45241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 240 Query 45242 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 45273 |||||||||||||||||||||||||||||||| Sbjct 241 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 272 >seq236944 Length=271 Score = 489 bits (542), Expect = 5e-134 Identities = 271/271 (100%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 36081 GCAGCAATCAGGATTGCAATCATGGTTCCTGCATATGATGACAATGTCGCCCCAAGACCA 36140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCAGCAATCAGGATTGCAATCATGGTTCCTGCATATGATGACAATGTCGCCCCAAGACCA 60 Query 36141 TCTCTATGAGCTGAAAAAGAAACACCAGGAATGTAGTGGCGGAAAAGGAGATAGCAAATG 36200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCTCTATGAGCTGAAAAAGAAACACCAGGAATGTAGTGGCGGAAAAGGAGATAGCAAATG 120 Query 36201 CTTACGATAACGTAAGGAATTATTACTATGTAAACACCAGGCATGATTCTGTTCCGCATA 36260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTTACGATAACGTAAGGAATTATTACTATGTAAACACCAGGCATGATTCTGTTCCGCATA 180 Query 36261 ATTACTCCTGATAATTAATCCTTAACTTTGCCCACCTGCCTTTTAAAACATTCCAGTATA 36320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ATTACTCCTGATAATTAATCCTTAACTTTGCCCACCTGCCTTTTAAAACATTCCAGTATA 240 Query 36321 TCACTTTTCATTCTTGCGTAGCAATATGCCA 36351 ||||||||||||||||||||||||||||||| Sbjct 241 TCACTTTTCATTCTTGCGTAGCAATATGCCA 271 >seq234085 Length=323 Score = 480 bits (532), Expect = 3e-131 Identities = 295/323 (91%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 1292 GTTCCTGGGTGACAAGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 1351 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTTCCTGGGTGACATGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 60 Query 1352 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 1411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 120 Query 1412 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 1471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 180 Query 1472 AGAGACGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCAGCGTGTTTTATCTCTG 1531 |||||||||| ||||||||||||||||||||||| Sbjct 181 AGAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGTGTTTTATCTCTG 240 Query 1532 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 1591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 300 Query 1592 CTGCGAAAAGACCGGGATCTGGA 1614 ||||||||||||||||||||||| Sbjct 301 CTGCGAAAAGACCGGGATCTGGA 323 >seq237382 Length=259 Score = 468 bits (518), Expect = 2e-127 Identities = 259/259 (100%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 42204 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 42263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 42264 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 42323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 42324 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 42383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 42384 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATGGCTAAACCA 42443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATGGCTAAACCA 240 Query 42444 GCGCGAAGACGATGTAAAA 42462 ||||||||||||||||||| Sbjct 241 GCGCGAAGACGATGTAAAA 259 >seq235925 Length=245 Score = 206 bits (228), Expect = 8e-49 Identities = 116/117 (99%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 3645 GAGCGCCATTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 3704 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117 GAGCGCCGTTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 58 Query 3705 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGG 3761 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGG 1 Score = 111 bits (122), Expect = 5e-20 Identities = 64/66 (97%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 3483 GCAGAAATGGACATGGATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCACGT 3542 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 245 GCAGAAATGGACATGGATTCCCCGTGAGTTCCCCGGCGGGCGCGCCTCGTTCATTCACGT 186 Query 3543 TTTTGA 3548 |||||| Sbjct 185 TTTTGA 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154647202453952