Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_001416.1
Length=48502
Score E
Sequences producing significant alignments: (Bits) Value
seq235879 690 0.0
seq237002 666 0.0
seq237313 600 4e-167
seq237567 491 1e-134
seq236944 489 5e-134
seq234085 480 3e-131
seq237382 468 2e-127
seq235925 206 8e-49
>seq235879
Length=423
Score = 690 bits (764), Expect = 0.0
Identities = 403/423 (95%), Gaps = 0/423 (0%)
Strand=Plus/Minus
Query 26080 CATACAACCAATAAATGCTGAAATGAATTCTAAGCGGAGATCGCCTAGTGATTTTAAACT 26139
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 CATGCAACCAATAAATGCTGAAATGAATTCTAAGCGGAGATCGCCTAGTGATTTTAAACT 364
Query 26140 ATTGCTGGCAGCATTCTTGAGTCCAATATAAAAGTATTGTGTACCTTTTGCTGGGTCAGG 26199
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 363 ATTGCTGGCAGCATTCTTGAGTCCAATATAAAAGTATTGTGTGCCTTTTGCTGGGTCAGG 304
Query 26200 TTGTTCTTTAGGAGGAGTAAAAGGATCAAATGCACTAAACGAAACTGAAACAAGCGATCG 26259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 303 TTGTTCTTTAGGAGGAGTAAAAGGATCAAATGCACTAAACGAAACTGAAACAAGCGATCG 244
Query 26260 AAAATATCCCTTTGGGATTCTTGACTCGATAAGTCTATTATTTTCAGAGAAAAAATATTC 26319
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 AAAATATCCCTTTGGGATTCTTGACTCGATAAGTCTATTATTTTCNNNNNNNNNNNNNNN 184
Query 26320 ATTGTTTTCTGGGTTGGTGATTGCACCAATCATTCCATTCAAAATTGTTGTTTTACCACA 26379
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 NNNGTTTTCTGGGTTGGTGATTGCACCAATCATTCCATTCAAAATTGTTGTTTTACCACA 124
Query 26380 CCCATTCCGCCCGATAAAAGCATGAATGTTCGTGCTGGGCATAGAATTAACCGTCACCTC 26439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 CCCATTCCGCCCGATAAAAGCATGAATGTTCGTGCTGGGCATAGAATTAACCGTCACCTC 64
Query 26440 AAAAGGTATAGTTAAATCACTGAATCCGGGAGCACTTTTTCTATTAAATGAAAAGTGGAA 26499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63 AAAAGGTATAGTTAAATCACTGAATCCGGGAGCACTTTTTCTATTAAATGAAAAGTGGAA 4
Query 26500 ATC 26502
|||
Sbjct 3 ATC 1
>seq237002
Length=369
Score = 666 bits (738), Expect = 0.0
Identities = 369/369 (100%), Gaps = 0/369 (0%)
Strand=Plus/Minus
Query 46999 CCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTT 47058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 CCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTT 310
Query 47059 GTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATC 47118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 GTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATC 250
Query 47119 TTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCC 47178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249 TTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCC 190
Query 47179 TGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGAT 47238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 189 TGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGAT 130
Query 47239 GCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAACACGGTGT 47298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129 GCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAACACGGTGT 70
Query 47299 TATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGA 47358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 TATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGA 10
Query 47359 CGTTGTGAC 47367
|||||||||
Sbjct 9 CGTTGTGAC 1
>seq237313
Length=339
Score = 600 bits (664), Expect = 4e-167
Identities = 335/337 (99%), Gaps = 0/337 (0%)
Strand=Plus/Plus
Query 45881 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCGG 45940
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60
Query 45941 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 46000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120
Query 46001 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 46060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180
Query 46061 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 46120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240
Query 46121 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 46180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300
Query 46181 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGAT 46217
|||||||||||||||||||||||||||||||||||||
Sbjct 301 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTGAT 337
>seq237567
Length=272
Score = 491 bits (544), Expect = 1e-134
Identities = 272/272 (100%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 45002 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 45061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60
Query 45062 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 45121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120
Query 45122 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 45181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTA 180
Query 45182 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 45241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACA 240
Query 45242 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 45273
||||||||||||||||||||||||||||||||
Sbjct 241 AGGCATCGGGGCAATCCTTGCGTTTGCAATGG 272
>seq236944
Length=271
Score = 489 bits (542), Expect = 5e-134
Identities = 271/271 (100%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 36081 GCAGCAATCAGGATTGCAATCATGGTTCCTGCATATGATGACAATGTCGCCCCAAGACCA 36140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GCAGCAATCAGGATTGCAATCATGGTTCCTGCATATGATGACAATGTCGCCCCAAGACCA 60
Query 36141 TCTCTATGAGCTGAAAAAGAAACACCAGGAATGTAGTGGCGGAAAAGGAGATAGCAAATG 36200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCTCTATGAGCTGAAAAAGAAACACCAGGAATGTAGTGGCGGAAAAGGAGATAGCAAATG 120
Query 36201 CTTACGATAACGTAAGGAATTATTACTATGTAAACACCAGGCATGATTCTGTTCCGCATA 36260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CTTACGATAACGTAAGGAATTATTACTATGTAAACACCAGGCATGATTCTGTTCCGCATA 180
Query 36261 ATTACTCCTGATAATTAATCCTTAACTTTGCCCACCTGCCTTTTAAAACATTCCAGTATA 36320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 ATTACTCCTGATAATTAATCCTTAACTTTGCCCACCTGCCTTTTAAAACATTCCAGTATA 240
Query 36321 TCACTTTTCATTCTTGCGTAGCAATATGCCA 36351
|||||||||||||||||||||||||||||||
Sbjct 241 TCACTTTTCATTCTTGCGTAGCAATATGCCA 271
>seq234085
Length=323
Score = 480 bits (532), Expect = 3e-131
Identities = 295/323 (91%), Gaps = 0/323 (0%)
Strand=Plus/Plus
Query 1292 GTTCCTGGGTGACAAGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 1351
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTTCCTGGGTGACATGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 60
Query 1352 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 120
Query 1412 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 180
Query 1472 AGAGACGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCAGCGTGTTTTATCTCTG 1531
|||||||||| |||||||||||||||||||||||
Sbjct 181 AGAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGTGTTTTATCTCTG 240
Query 1532 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 300
Query 1592 CTGCGAAAAGACCGGGATCTGGA 1614
|||||||||||||||||||||||
Sbjct 301 CTGCGAAAAGACCGGGATCTGGA 323
>seq237382
Length=259
Score = 468 bits (518), Expect = 2e-127
Identities = 259/259 (100%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 42204 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 42263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60
Query 42264 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 42323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120
Query 42324 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 42383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180
Query 42384 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATGGCTAAACCA 42443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATGGCTAAACCA 240
Query 42444 GCGCGAAGACGATGTAAAA 42462
|||||||||||||||||||
Sbjct 241 GCGCGAAGACGATGTAAAA 259
>seq235925
Length=245
Score = 206 bits (228), Expect = 8e-49
Identities = 116/117 (99%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 3645 GAGCGCCATTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 3704
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 117 GAGCGCCGTTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 58
Query 3705 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGG 3761
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGG 1
Score = 111 bits (122), Expect = 5e-20
Identities = 64/66 (97%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 3483 GCAGAAATGGACATGGATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCACGT 3542
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 245 GCAGAAATGGACATGGATTCCCCGTGAGTTCCCCGGCGGGCGCGCCTCGTTCATTCACGT 186
Query 3543 TTTTGA 3548
||||||
Sbjct 185 TTTTGA 180
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154647202453952
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