Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq234085 239 1e-58 seq235925 96.9 1e-15 >seq234085 Length=323 Score = 239 bits (264), Expect = 1e-58 Identities = 246/322 (76%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 1149 TTCCTGGGGGATAAGCGTATCGAGGGCTCTGTTTGGCCCAAATCCATACGCGGTTCGACA 1208 |||||||| || | |||||| || ||||| || ||||| || ||||| || || || || Sbjct 2 TTCCTGGGTGACATGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCACG 61 Query 1209 CCGAAATTGCGTGGAACGTGTCAGATTGAGCGAGCAGCAAAAGAGTCCGGGCATTTTATG 1268 || ||| || | || || |||||||||||||| ||||| | || ||| |||||||||| Sbjct 62 CCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTATG 121 Query 1269 CGATTTCATGTCGCATGCCCGCATTGTGGTGAAGAGCAATATCTTAAATTTGGTGACCGG 1328 || |||||||| || ||||||||||| || || ||||| |||||||||||||| ||| Sbjct 122 CGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAAA 181 Query 1329 GATACGCCTTTTGGCTTCAAATGGGAGCCTGAGCAGGCCGAAACGGTCTACTACCTCTGC 1388 || ||||| |||||| |||||||| ||| || | || | || | || |||||| Sbjct 182 GAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGTGTTTTATCTCTGC 241 Query 1389 GAGCATAATGCTTGTGTCATTAAGCAACATGAACTGGACTTTTCCAACGCTCGTTATATT 1448 ||||||||||| || ||||| || || || ||||||||| | | || |||||||| Sbjct 242 GAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATATC 301 Query 1449 TGCGAATTGACCGGAATATGGA 1470 |||||| |||||| || |||| Sbjct 302 TGCGAAAAGACCGGGATCTGGA 323 >seq235925 Length=245 Score = 96.9 bits (106), Expect = 1e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3492 GAGCGCGATAGTGAAGGCTATGTATGCGGCTACCATCGAGAGTGAGCTGGATACCCAATC 3551 |||||| | |||||||| |||||||| || ||||| ||||||||||||||||| || || Sbjct 117 GAGCGCCGTTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 58 Query 3552 GGCGATGGACTTTATTCTCGGTGCAGATAATAAAGAGCAGC 3592 |||||||| |||||||| || || | | | | ||||||| Sbjct 57 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGC 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147860007843116