Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq21383 203 3e-47 seq53127 102 7e-17 seq44559 95.1 1e-14 seq31223 87.8 1e-12 seq88586 84.2 2e-11 >seq21383 Length=8822 Score = 203 bits (224), Expect = 3e-47 Identities = 434/640 (68%), Gaps = 19/640 (3%) Strand=Plus/Minus Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823 |||||||| |||||||| || || || |||||||||| || |||||||| || |||||| Sbjct 1581 GGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTC 1522 Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGT-TTCTTTTTTCAACGTCGTG 97882 || | | | ||| ||||| || |||| ||||| ||| |||| || ||| Sbjct 1521 CATGTTAGAAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTAGATTTGTCAAC 1463 Query 97883 CATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATG 97942 | || |||| || || | || ||||| || || || || |||||||| || | | Sbjct 1462 TAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTC 1403 Query 97943 TGGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCA 98002 ||| ||| ||| | ||| ||||| ||||| ||||||||||| || |||||||| Sbjct 1402 AGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCA 1343 Query 98003 AGCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTT 98062 | |||| || ||||| |||||||||| || ||||| ||||||||||| | ||||| Sbjct 1342 TGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTT 1283 Query 98063 GAAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTT 98122 ||| || || || || || || ||||| || || |||| ||||| || || ||| Sbjct 1282 GAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTT 1223 Query 98123 GAGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAGTGCGA 98182 | || || || || || || ||||| || || || || ||||| | ||| || | Sbjct 1222 TAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGT 1163 Query 98183 TAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGAC 98242 | ||| || | || | || ||||| || | | || |||||||| || || Sbjct 1162 AAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTAC 1103 Query 98243 AAAGTACGCAGCGACAATTTTATCC---TCTCTTC-TGCCGGGTTTGTTGTTTTCCAGCC 98298 ||||| ||| | |||| ||| ||| | | | | || || || || ||||| | Sbjct 1102 GAAGTAGGCACCCACAACTTT-TCCAGATGTTTGCTTGAACGGCTTATTTTTTTCTCCCA 1044 Query 98299 ATGTGTATTCGAGCGGCGCCAGATGACCGCCGTCGGTGTCTGCGATTTTGACCAACAC-- 98356 |||||||||| || || | | ||||| || ||||| || || | ||| | | Sbjct 1043 ATGTGTATTCTAGAGGAGGTAAATGACTTCCATCGGTATCGGCCA---CGACAATTTCGG 987 Query 98357 -GGGATCGCTTATGGAA---CAGCCGTCCTCATTGCAAAG 98392 |||||| ||| ||| |||||||| ||||||||||| Sbjct 986 TGGGATCACTT---GAACTGCAGCCGTCTTCATTGCAAAG 950 >seq53127 Length=7988 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||||||||| | || ||| |||| |||||||| || || ||| |||| | | Sbjct 6053 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6112 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | ||| ||||||| || |||||||| | || || || Sbjct 6113 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCA 6172 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| || ||||| ||||| || ||||| |||||||| || || | ||||| || Sbjct 6173 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 6232 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTG 25244 ||||||||||||||||||| | ||| ||||| Sbjct 6233 TATTCAAAAGGAATCTACTTTGCACTTGGTG 6263 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||||||||| | || ||| |||| |||||||| || || ||| |||| | | Sbjct 6509 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6568 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | ||| |||||| |||||||| || | ||| |||||| Sbjct 6569 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 6628 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211 ||||||||||| ||||| || || || | |||||| | | ||||| | || ||| Sbjct 6629 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 6686 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGT 25243 |||||||| |||||||||||| | || |||| Sbjct 6687 AATATTCAGAAGGAATCTACTTTGCATCTGGT 6718 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | || ||| |||| ||||| || || || ||| |||| | | Sbjct 6281 AATGCAAATTTTTGTTAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 6340 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || ||||||| |||||||| ||| | ||| |||||| Sbjct 6341 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCA 6400 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211 ||||||||||| ||||| || || || | |||||| | | ||||| | || ||| Sbjct 6401 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 6458 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| |||||||| ||| | ||| |||| | || || |||| || Sbjct 6459 AATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGTTGAGAGGTGG 6508 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| ||| | || ||| |||| ||||| || || || ||| || || | Sbjct 5825 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 5884 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || ||||||| |||||||| || | ||| |||||| Sbjct 5885 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 5944 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211 ||||||||||| ||||| || || || | |||||| | | ||||| | |||||| Sbjct 5945 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGATTAC 6002 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || ||||| || ||||||||| | ||| | || |||| Sbjct 6003 AACATTCAGAAAGAATCTACTTTGCACCTAGTACTACG 6040 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | ||||| || || || |||||||| || ||| |||| | | Sbjct 5598 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 5657 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||| ||| ||| || || ||||| | || ||||||| Sbjct 5658 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAA 5717 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||||| || || || || || |||||||||||| || || | || || ||| Sbjct 5718 CAAAGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTGTCAGACTATAAT 5777 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || |||||||||||| | ||| | || || || Sbjct 5778 ATCCAGAAGGAATCTACTTTGCACTTAGTTTTGCG 5812 >seq44559 Length=2984 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||||||||| ||||||||||||| || || ||||||||| ||| ||||| | Sbjct 436 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 495 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || |||| ||||| ||||| || || | ||| ||| ||| Sbjct 496 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 555 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | || || ||||| || || |||||||||||| ||| || | ||||||||| Sbjct 556 CAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 615 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 ||||| || || || || || ||| | ||| Sbjct 616 ATTCAGAAAGAGTCAACCCTGCACTTAGTG 645 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||||||||| |||||||| | || || ||||| || || ||| || || | Sbjct 663 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCTTC 722 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 ||| || | | || | || || ||| ||||| ||||| | || |||||| Sbjct 723 AGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 782 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 |||| | |||||||| || || || ||| |||||||| | || || | || ||||| Sbjct 783 ACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 842 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||| || || || || || |||||| |||| | || | |||||||| Sbjct 843 TATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 890 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | || ||| |||| || ||||| || || ||| |||||| || Sbjct 892 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 951 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | || || || || ||||| ||| | ||| ||||||| Sbjct 952 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1011 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || || || || ||||| || |||| ||| | ||| | | || |||||| Sbjct 1012 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAAT 1071 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| || || || ||| | ||| |||| ||||| ||||||||||| Sbjct 1072 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 1118 >seq31223 Length=3647 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 |||||||| || || | |||||| | ||||| ||||||||||| ||| ||||| Sbjct 732 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 673 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | || | || |||||| || || ||||| | || |||| Sbjct 672 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 613 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 |||||| | | || || || || || ||||||||||| ||| | | || || Sbjct 612 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTAT 553 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||||||||| ||||||||||||||| |||| || || Sbjct 552 AATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 515 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||| ||| | ||| ||||||||| || ||||| ||||| || |||||| ||||| Sbjct 408 GACAAAGAGGGTATTCCCCCAGATCAACAGAGGCTTATTTTTGCTGGAAAACAACTGGAA 349 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 ||| | || | | ||||| ||||||||||||||||| || || || Sbjct 348 GATGGCCGTACATTATCTGATTATAATATTCAAAAGGAATCGACCCTACA 299 >seq88586 Length=4530 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 25026 AGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACG 25085 ||| | | ||||||||| ||| |||| || | ||||| |||||||||||| ||| | Sbjct 2414 AGTCTCACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTG 2355 Query 25086 GAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCC 25145 || || | || || | | || | || ||||| ||||| |||||| | || Sbjct 2354 GAGGCCTCTGATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCA 2295 Query 25146 GTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCC 25205 ||| || ||| | | |||||||| || |||||| | |||||| || || | Sbjct 2294 CCAGACCAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCT 2235 Query 25206 GATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||| |||||||||||||| || | || | ||| | ||| | || ||||| Sbjct 2234 GACTACAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGG 2179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409607165074196