Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq21383 203 3e-47
seq53127 102 7e-17
seq44559 95.1 1e-14
seq31223 87.8 1e-12
seq88586 84.2 2e-11
>seq21383
Length=8822
Score = 203 bits (224), Expect = 3e-47
Identities = 434/640 (68%), Gaps = 19/640 (3%)
Strand=Plus/Minus
Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823
|||||||| |||||||| || || || |||||||||| || |||||||| || ||||||
Sbjct 1581 GGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTC 1522
Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGT-TTCTTTTTTCAACGTCGTG 97882
|| | | | ||| ||||| || |||| ||||| ||| |||| || |||
Sbjct 1521 CATGTTAGAAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTAGATTTGTCAAC 1463
Query 97883 CATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATG 97942
| || |||| || || | || ||||| || || || || |||||||| || | |
Sbjct 1462 TAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTC 1403
Query 97943 TGGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCA 98002
||| ||| ||| | ||| ||||| ||||| ||||||||||| || ||||||||
Sbjct 1402 AGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCA 1343
Query 98003 AGCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTT 98062
| |||| || ||||| |||||||||| || ||||| ||||||||||| | |||||
Sbjct 1342 TGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTT 1283
Query 98063 GAAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTT 98122
||| || || || || || || ||||| || || |||| ||||| || || |||
Sbjct 1282 GAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTT 1223
Query 98123 GAGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAGTGCGA 98182
| || || || || || || ||||| || || || || ||||| | ||| || |
Sbjct 1222 TAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGT 1163
Query 98183 TAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGAC 98242
| ||| || | || | || ||||| || | | || |||||||| || ||
Sbjct 1162 AAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTAC 1103
Query 98243 AAAGTACGCAGCGACAATTTTATCC---TCTCTTC-TGCCGGGTTTGTTGTTTTCCAGCC 98298
||||| ||| | |||| ||| ||| | | | | || || || || ||||| |
Sbjct 1102 GAAGTAGGCACCCACAACTTT-TCCAGATGTTTGCTTGAACGGCTTATTTTTTTCTCCCA 1044
Query 98299 ATGTGTATTCGAGCGGCGCCAGATGACCGCCGTCGGTGTCTGCGATTTTGACCAACAC-- 98356
|||||||||| || || | | ||||| || ||||| || || | ||| | |
Sbjct 1043 ATGTGTATTCTAGAGGAGGTAAATGACTTCCATCGGTATCGGCCA---CGACAATTTCGG 987
Query 98357 -GGGATCGCTTATGGAA---CAGCCGTCCTCATTGCAAAG 98392
|||||| ||| ||| |||||||| |||||||||||
Sbjct 986 TGGGATCACTT---GAACTGCAGCCGTCTTCATTGCAAAG 950
>seq53127
Length=7988
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||||||||| | || ||| |||| |||||||| || || ||| |||| | |
Sbjct 6053 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6112
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | ||| ||||||| || |||||||| | || || ||
Sbjct 6113 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCA 6172
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
||| || ||||| ||||| || ||||| |||||||| || || | ||||| ||
Sbjct 6173 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 6232
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTG 25244
||||||||||||||||||| | ||| |||||
Sbjct 6233 TATTCAAAAGGAATCTACTTTGCACTTGGTG 6263
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||||||||| | || ||| |||| |||||||| || || ||| |||| | |
Sbjct 6509 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6568
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | ||| |||||| |||||||| || | ||| ||||||
Sbjct 6569 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 6628
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211
||||||||||| ||||| || || || | |||||| | | ||||| | || |||
Sbjct 6629 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 6686
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGT 25243
|||||||| |||||||||||| | || ||||
Sbjct 6687 AATATTCAGAAGGAATCTACTTTGCATCTGGT 6718
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
||||||||| || | || ||| |||| ||||| || || || ||| |||| | |
Sbjct 6281 AATGCAAATTTTTGTTAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 6340
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | || ||||||| |||||||| ||| | ||| ||||||
Sbjct 6341 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCA 6400
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211
||||||||||| ||||| || || || | |||||| | | ||||| | || |||
Sbjct 6401 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 6458
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|||||||| |||||||| ||| | ||| |||| | || || |||| ||
Sbjct 6459 AATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGTTGAGAGGTGG 6508
Score = 86.0 bits (94), Expect = 5e-12
Identities = 151/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
||||||||| ||| | || ||| |||| ||||| || || || ||| || || |
Sbjct 5825 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 5884
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | || ||||||| |||||||| || | ||| ||||||
Sbjct 5885 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 5944
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211
||||||||||| ||||| || || || | |||||| | | ||||| | ||||||
Sbjct 5945 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGATTAC 6002
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249
|| ||||| || ||||||||| | ||| | || ||||
Sbjct 6003 AACATTCAGAAAGAATCTACTTTGCACCTAGTACTACG 6040
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| | ||||| || || || |||||||| || ||| |||| | |
Sbjct 5598 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 5657
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||| ||| ||| || || ||||| | || |||||||
Sbjct 5658 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAA 5717
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||||| || || || || || |||||||||||| || || | || || |||
Sbjct 5718 CAAAGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTGTCAGACTATAAT 5777
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249
|| || |||||||||||| | ||| | || || ||
Sbjct 5778 ATCCAGAAGGAATCTACTTTGCACTTAGTTTTGCG 5812
>seq44559
Length=2984
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||||||||| ||||||||||||| || || ||||||||| ||| ||||| |
Sbjct 436 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 495
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || |||| ||||| ||||| || || | ||| ||| |||
Sbjct 496 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 555
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| | || || ||||| || || |||||||||||| ||| || | |||||||||
Sbjct 556 CAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 615
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244
||||| || || || || || ||| | |||
Sbjct 616 ATTCAGAAAGAGTCAACCCTGCACTTAGTG 645
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||||||||| |||||||| | || || ||||| || || ||| || || |
Sbjct 663 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCTTC 722
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
||| || | | || | || || ||| ||||| ||||| | || ||||||
Sbjct 723 AGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 782
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
|||| | |||||||| || || || ||| |||||||| | || || | || |||||
Sbjct 783 ACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 842
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||| || || || || || |||||| |||| | || | ||||||||
Sbjct 843 TATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 890
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || || | || ||| |||| || ||||| || || ||| |||||| ||
Sbjct 892 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 951
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | || || || || ||||| ||| | ||| |||||||
Sbjct 952 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1011
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
||| | || || || || ||||| || |||| ||| | ||| | | || ||||||
Sbjct 1012 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAAT 1071
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| || || || ||| | ||| |||| ||||| |||||||||||
Sbjct 1072 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 1118
>seq31223
Length=3647
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|||||||| || || | |||||| | ||||| ||||||||||| ||| |||||
Sbjct 732 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 673
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | || | || |||||| || || ||||| | || ||||
Sbjct 672 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 613
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|||||| | | || || || || || ||||||||||| ||| | | || ||
Sbjct 612 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTAT 553
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249
||||||||||| ||||||||||||||| |||| || ||
Sbjct 552 AATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 515
Score = 82.4 bits (90), Expect = 6e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| ||||| ||| | ||| ||||||||| || ||||| ||||| || |||||| |||||
Sbjct 408 GACAAAGAGGGTATTCCCCCAGATCAACAGAGGCTTATTTTTGCTGGAAAACAACTGGAA 349
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237
||| | || | | ||||| ||||||||||||||||| || || ||
Sbjct 348 GATGGCCGTACATTATCTGATTATAATATTCAAAAGGAATCGACCCTACA 299
>seq88586
Length=4530
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 25026 AGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACG 25085
||| | | ||||||||| ||| |||| || | ||||| |||||||||||| ||| |
Sbjct 2414 AGTCTCACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTG 2355
Query 25086 GAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCC 25145
|| || | || || | | || | || ||||| ||||| |||||| | ||
Sbjct 2354 GAGGCCTCTGATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCA 2295
Query 25146 GTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCC 25205
||| || ||| | | |||||||| || |||||| | |||||| || || |
Sbjct 2294 CCAGACCAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCT 2235
Query 25206 GATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||| |||||||||||||| || | || | ||| | ||| | || |||||
Sbjct 2234 GACTACAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGG 2179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409607165074196
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