Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq237567 372 8e-99 seq237382 340 5e-89 seq237313 340 5e-89 >seq237567 Length=272 Score = 372 bits (412), Expect = 8e-99 Identities = 243/259 (94%), Gaps = 9/259 (3%) Strand=Plus/Plus Query 36083 CTTCGTGAAAGCGGGTGGCAGGAGGTTGCGCTAACAACCTCATGCCGTTTG--CCGTGCA 36140 |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 36141 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAAC-TGGATTTGTTCTATCAGTAA 36199 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 36200 TCGGCCTTAT-CCTAATTAAATAGAGCAAT--CCCTTATTGGGGGTAAGACATGAAGATG 36256 ||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 193 Query 36257 CCAGAAAAA-ATGAC-TGTAG-CCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 36313 ||||||||| ||||| ||| | |||||||||||||||||||||||||||||||||||||| Sbjct 194 CCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 253 Query 36314 ATCCTTGCGTTTGCAATGG 36332 ||||||||||||||||||| Sbjct 254 ATCCTTGCGTTTGCAATGG 272 >seq237382 Length=259 Score = 340 bits (376), Expect = 5e-89 Identities = 214/231 (93%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 33412 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 33471 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 33472 ACAAGGTGATTGACCCAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGGGCTTTAACGT 33531 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 33532 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTTGAAGTTCACGTGTGCTCCGATTGCTGCG 33591 ||||||||||||||||||||||||||||||| |||||||||||||| | ||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 33592 CAGAGCTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAGACGATG 33642 |||| ||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATG 231 >seq237313 Length=339 Score = 340 bits (376), Expect = 5e-89 Identities = 263/315 (83%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 36940 CTGGTTATGGCCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCAG 36999 |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 37000 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 37059 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 37060 TATCTGCATCATCGTTTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATCGC 37119 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 37120 CTACAAAGAGCAGCGCGACAAA---GCCGCA----TCCATC--------------ATCGC 37158 |||||||| |||||||||||| ||| | | | | || | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 37159 TGACATGCAGAAGCGTCAACGTGATGTAGCAGAACTTGACGCCAGATACACAAAGGAGCT 37218 ||||||||||| |||||| |||||||| || | || || || | |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 37219 TGCTGATGCTAACGC 37233 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126662389695592