Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_002371.2 Length=41724 Score E Sequences producing significant alignments: (Bits) Value seq237382 246 8e-61 seq237567 172 1e-38 seq237313 143 7e-30 >seq237382 Length=259 Score = 246 bits (272), Expect = 8e-61 Identities = 154/166 (93%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 35862 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 35921 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 35922 AAGTTCATGTATGTGAAGCGTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 35981 ||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 35982 ACGAGGAAGAAGACGATGGCTAAATCAGCGCGAAGACGATGCAAAA 36027 ||||||||||||| |||||||||| |||||||||||||||| |||| Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259 Score = 100 bits (110), Expect = 8e-17 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 35438 ACCTTCAATTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 35497 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 >seq237567 Length=272 Score = 172 bits (190), Expect = 1e-38 Identities = 201/265 (76%), Gaps = 11/265 (4%) Strand=Plus/Plus Query 38075 CTTCGTGAAGATGGGTGGCAAGAGACTGCGCTAACAGCCTCTTGCCTGATCTGCCCATGC 38134 ||||||||| |||||||| ||| ||||||||| |||| |||| | | ||||| ||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCC-GTTTTGCCCGTGC 72 Query 38135 -TCTTAATCACGGACAAACCACGTTACCGCAAAATGTATCCTGGATTTGTTCTTTCCAAT 38193 | | ||||| ||||| | |||| | | ||| |||||||||||||| || Sbjct 73 ATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTA 132 Query 38194 ATCAACCA-ATTCATAAC---ATTGAACAAATCCTCACGGTCGTGAGGTAAGACATGAAA 38249 ||| ||| |||| ||| || || ||||||| | | | | |||||||||||| Sbjct 133 ATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGG--GTAAGACATGAA- 189 Query 38250 AAGATGCCAGAAAAACATGATCTGTTAACCGCCATGATGGCGGCAAAGGAACAGGGCATC 38309 |||||||||||||||||| ||||| ||||||| | |||||||||||||| |||||| Sbjct 190 --GATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATC 247 Query 38310 GGGGCAATCCTTGCGTTTGCAATGG 38334 ||||||||||||||||||||||||| Sbjct 248 GGGGCAATCCTTGCGTTTGCAATGG 272 >seq237313 Length=339 Score = 143 bits (158), Expect = 7e-30 Identities = 148/196 (76%), Gaps = 21/196 (11%) Strand=Plus/Plus Query 39022 TTATCTGCATCATCGTCTGTCTTTCGTGGGCTGTTAATCATTATCGTGATAACGCCATCA 39081 ||||||||||||||||||| || || ||||||||||||||||| |||||||||||||| | Sbjct 120 TTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTA 179 Query 39082 CCTACAAAGAGCAGCGCGATAAA---GCCACA----TCAATC--------------ATCG 39120 ||||||||| |||||||| ||| |||| | | || | || Sbjct 180 CCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTA 239 Query 39121 CTGATATGCAGAAGCGTCAACGAGATGTAGCAGAACTCGATGCCAGATACACAAAGGAGC 39180 |||| ||||||| |||||| || ||||| || | |||||||| | |||||| |||||| Sbjct 240 CTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGT 299 Query 39181 TTGCTGATGCTAACGC 39196 | ||||||||||| || Sbjct 300 TAGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133018803266248