Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_002371.2
Length=41724
Score E
Sequences producing significant alignments: (Bits) Value
seq237382 246 8e-61
seq237567 172 1e-38
seq237313 143 7e-30
>seq237382
Length=259
Score = 246 bits (272), Expect = 8e-61
Identities = 154/166 (93%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 35862 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 35921
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153
Query 35922 AAGTTCATGTATGTGAAGCGTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 35981
||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213
Query 35982 ACGAGGAAGAAGACGATGGCTAAATCAGCGCGAAGACGATGCAAAA 36027
||||||||||||| |||||||||| |||||||||||||||| ||||
Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259
Score = 100 bits (110), Expect = 8e-17
Identities = 58/60 (97%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 35438 ACCTTCAATTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 35497
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60
>seq237567
Length=272
Score = 172 bits (190), Expect = 1e-38
Identities = 201/265 (76%), Gaps = 11/265 (4%)
Strand=Plus/Plus
Query 38075 CTTCGTGAAGATGGGTGGCAAGAGACTGCGCTAACAGCCTCTTGCCTGATCTGCCCATGC 38134
||||||||| |||||||| ||| ||||||||| |||| |||| | | ||||| |||
Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCC-GTTTTGCCCGTGC 72
Query 38135 -TCTTAATCACGGACAAACCACGTTACCGCAAAATGTATCCTGGATTTGTTCTTTCCAAT 38193
| | ||||| ||||| | |||| | | ||| |||||||||||||| ||
Sbjct 73 ATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTA 132
Query 38194 ATCAACCA-ATTCATAAC---ATTGAACAAATCCTCACGGTCGTGAGGTAAGACATGAAA 38249
||| ||| |||| ||| || || ||||||| | | | | ||||||||||||
Sbjct 133 ATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGG--GTAAGACATGAA- 189
Query 38250 AAGATGCCAGAAAAACATGATCTGTTAACCGCCATGATGGCGGCAAAGGAACAGGGCATC 38309
|||||||||||||||||| ||||| ||||||| | |||||||||||||| ||||||
Sbjct 190 --GATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATC 247
Query 38310 GGGGCAATCCTTGCGTTTGCAATGG 38334
|||||||||||||||||||||||||
Sbjct 248 GGGGCAATCCTTGCGTTTGCAATGG 272
>seq237313
Length=339
Score = 143 bits (158), Expect = 7e-30
Identities = 148/196 (76%), Gaps = 21/196 (11%)
Strand=Plus/Plus
Query 39022 TTATCTGCATCATCGTCTGTCTTTCGTGGGCTGTTAATCATTATCGTGATAACGCCATCA 39081
||||||||||||||||||| || || ||||||||||||||||| |||||||||||||| |
Sbjct 120 TTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTA 179
Query 39082 CCTACAAAGAGCAGCGCGATAAA---GCCACA----TCAATC--------------ATCG 39120
||||||||| |||||||| ||| |||| | | || | ||
Sbjct 180 CCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTA 239
Query 39121 CTGATATGCAGAAGCGTCAACGAGATGTAGCAGAACTCGATGCCAGATACACAAAGGAGC 39180
|||| ||||||| |||||| || ||||| || | |||||||| | |||||| ||||||
Sbjct 240 CTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGT 299
Query 39181 TTGCTGATGCTAACGC 39196
| ||||||||||| ||
Sbjct 300 TAGCTGATGCTAAAGC 315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133018803266248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |