Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq2359 132 7e-26 seq31223 120 5e-22 seq53127 111 2e-19 seq207359 98.7 1e-15 seq44559 86.0 9e-12 seq18229 86.0 9e-12 >seq2359 Length=54862 Score = 132 bits (146), Expect = 7e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 10481 TAAATTTATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGT 10540 |||| || ||| || |||||| || || || ||||| || | ||||| | ||||| Sbjct 18597 TAAAATTTTTGTATTTATAGCTGGTGTCATAGATGAAGACTACCGTGGAAACATTGGAGT 18538 Query 10541 AATATTATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCA 10600 | ||||| |||||||| | |||||||||| | | || | ||| |||||||| |||| Sbjct 18537 GGTGTTATTCAATCATTCCAGTGAAGATTTTGCAGTTAAAAAAGGTGATAGAATTGCTCA 18478 Query 10601 ATTAATATGTGAAAAAATTTTATATCCTAAAATGTTAAAAGTCGATAGTTTATCAGAAAC 10660 | |||||||||||| |||||| || || | || | |||| || | | |||||||||| Sbjct 18477 ACTAATATGTGAAAGAATTTTCTACCCAGATATAGTTGAAGTTGACAATCTATCAGAAAC 18418 Query 10661 AAAAAGATCTGATTTTGGTTTTGGATCTACTGG 10693 ||||||| || ||||||||| ||||| || Sbjct 18417 AAAAAGAGGGGAAGGTGGTTTTGGGTCTACAGG 18385 >seq31223 Length=3647 Score = 120 bits (132), Expect = 5e-22 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | ||| | |||||||| || | |||||||||||| |||||||| || | Sbjct 501 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAG 560 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||||||| | | || || ||||| |||||||| |||||||| | ||| ||||| |||| Sbjct 561 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 620 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| ||||| || ||||| |||||| ||| ||| | Sbjct 621 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 680 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280 |||| | || || |||||||| || | |||||| | || || |||||||| Sbjct 681 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 732 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | | | ||| || || |||||||||||||| || ||||| || || Sbjct 47 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTATAGTCAGAC 106 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| |||||||| || || |||||||| | | ||| ||||| |||||| Sbjct 107 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGAGGA 166 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||| ||||| || || ||| ||| ||| Sbjct 167 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 226 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| || |||||||| || || | |||||||| || |||||||| Sbjct 227 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAAATTTGCAT 273 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124 ||||| ||||||| || ||||| ||| || ||||||||||| || | || | || ||| Sbjct 290 AATACTAAATGTAGGGTCGATTCCTTTTGA-ATATTATAATCAGATAATGTACGGCCATC 348 Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 || | |||||||||||||||||| | || || ||||| || ||||| || ||||| || Sbjct 349 TTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTC 408 Query 146185 TTG 146187 ||| Sbjct 409 TTG 411 >seq53127 Length=7988 Score = 111 bits (122), Expect = 2e-19 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| || || | || || || || ||||||||||| || |||||||| |||| Sbjct 5826 TTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTG 5767 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| || ||||| ||||| || ||||| | |||||| ||||| |||| Sbjct 5766 ACAGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAG 5707 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 | || ||||| || ||||| ||||| ||| ||| | Sbjct 5706 GGATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCA 5647 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| | |||||| ||||| || ||||| ||||| | ||| |||||||| Sbjct 5646 CTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 5598 Score = 111 bits (122), Expect = 2e-19 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCT 146107 ||||||| ||||| | | ||||| || ||||||||||| ||| || |||||||||||| Sbjct 6282 TTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGA-ATATTATAATCT 6224 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 || || || | | ||| || | |||||||| |||||||| | || || || || ||| Sbjct 6223 GACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGA 6164 Query 146168 GGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCT 146227 ||||| |||||||| ||||| ||||| ||| ||| Sbjct 6163 GGAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 6104 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 ||||| | |||||| ||||| || || | ||| || | |||||||||||| Sbjct 6103 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6053 Score = 107 bits (118), Expect = 3e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || | || ||| | || |||||||||||||| || || ||||| | Sbjct 6054 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 5995 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| || | || |||||||||||||| | |||||||||||| || | Sbjct 5994 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 5935 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||| |||||||| || Sbjct 5934 GAATTCCCTCTTTATCCTG 5916 Score = 107 bits (118), Expect = 3e-18 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || | | ||||| ||| ||||||||||| || ||||| || || | Sbjct 6738 TTCCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 6679 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| || | || |||||||||||||| | |||||||||||| || | Sbjct 6678 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 6619 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| || |||||||| || ||||| ||| ||| | Sbjct 6618 GAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 6559 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||| | |||||| ||||| || || | ||| || | |||||||||||| Sbjct 6558 CTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6509 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||| |||||||||||||||||||| ||||| || || || Sbjct 6964 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 6905 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | || |||||||||||||| | ||||| || || |||||| Sbjct 6904 AGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 6845 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| |||||||| Sbjct 6844 ATGCCTTCCTTATCTTG 6828 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||||||||| | || | || | ||||||||||| |||||||| ||||| Sbjct 7648 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAC 7589 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || | ||| ||||| || ||||||| |||||| ||||| |||||| Sbjct 7588 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 7529 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| |||||||| Sbjct 7528 ATGCCTTCCTTATCTTG 7512 Score = 89.7 bits (98), Expect = 8e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| | | | ||||| || ||||| ||||| || ||||| || || | Sbjct 6510 TTCCACCTCTCAACCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAG 6451 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| || | || |||||||||||||| | |||||||||||| || | Sbjct 6450 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 6391 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| || |||||||| || Sbjct 6390 GAATACCCTCTTTATCCTG 6372 >seq207359 Length=487 Score = 98.7 bits (108), Expect = 1e-15 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124 ||||| ||||||| |||||||| ||| || ||||||||||| || | || | || ||| Sbjct 198 AATACTAAATGTAGGGTAGATTCCTTTTGA-ATATTATAATCAGATAATGTACGGCCATC 140 Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 || | |||||||||||| ||||||| || || ||||| || ||||| || ||||| || Sbjct 139 TTCCAGTTGTTTTCCAGCGAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTC 80 Query 146185 TTG 146187 ||| Sbjct 79 TTG 77 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | | | ||| || || |||||||||||||| || || || || || Sbjct 441 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 382 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| |||||||| || || |||||||| | | ||| |||||||||||| Sbjct 381 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 322 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||| ||||| || || ||| ||| ||| Sbjct 321 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 262 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| || |||||||| || || | |||||||| || |||||||| Sbjct 261 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 215 >seq44559 Length=2984 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | | ||| ||||| |||||||||||||| || ||||| || || Sbjct 1346 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAT 1287 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | || ||| ||||| ||||| |||||||| || | | || || || || ||| Sbjct 1286 AGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 1227 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || ||||| Sbjct 1226 ATGCCCTCCTTGTCTTG 1210 >seq18229 Length=13825 Score = 86.0 bits (94), Expect = 9e-12 Identities = 96/127 (76%), Gaps = 6/127 (5%) Strand=Plus/Minus Query 27418 GTAGATTCTCATAATATTATACCAGTATGGGTAACTTCAGATAAACAGGAATATAACGCA 27477 |||||| |||| ||| | | ||| ||||| |||| ||||||||||||||| ||| Sbjct 5435 GTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCAGCA 5376 Query 27478 AGAACAATAAGGATTAAAATAAA---TAAATTAAAAGATCAATATTTAATCGAATTTCCT 27534 ||||||||||| | |||||| || |||||| |||| ||||| | | ||||||||| Sbjct 5375 AGAACAATAAGAAATAAAATCAATTCTAAATT---AGATGAATATCTCACAGAATTTCCT 5319 Query 27535 AAAGTTA 27541 ||||| Sbjct 5318 CCAGTTA 5312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741317996474880