Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq44559 100 2e-16
seq31223 100 2e-16
seq53127 89.7 3e-13
seq207359 84.2 1e-11
>seq44559
Length=2984
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 34187 TGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGC 34246
|| |||||| |||||| || ||||| ||||| || || ||| | || || |||||
Sbjct 1322 TGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGATAGAGTGCGGCCATCCTCTAACTGT 1263
Query 34247 TTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTT 34306
|| || || || ||||| ||||| ||||| ||| | || ||||||||| |||||
Sbjct 1262 TTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTA 1203
Query 34307 TGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTG 34366
||| | || | || | |||| | || || |||| |||||||| || || ||
Sbjct 1202 GCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTA 1143
Query 34367 AGAGTTTTCACAAAGATCTGCAT 34389
||||| || ||||||||||||||
Sbjct 1142 AGAGTCTTAACAAAGATCTGCAT 1120
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240
|||| ||| ||||| |||||||| || |||||||| || || |||| | || |||
Sbjct 1100 ACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCATCCTCC 1041
Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300
| ||||||||| ||||||||||| || || || || ||| | | ||| |||||
Sbjct 1040 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGG 981
Query 34301 ATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359
||| || ||||| | || | || | || | | ||| || || | ||||| |||||
Sbjct 980 ATC-TTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTT 922
Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || || || ||||||||||||||
Sbjct 921 CCCTGTCAGTGTCTTTACAAAGATCTGCAT 892
>seq31223
Length=3647
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || |||| ||| | |||| |||||| || || || ||||| ||
Sbjct 502 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGA 561
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || |||| ||||| ||||| || |||||||| | || || || || ||
Sbjct 562 AAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 621
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
| || |||||||| || ||| ||||| | || | || | ||||| | ||| |
Sbjct 622 AATGCCTTCCTTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 680
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||| || |||||||| || || || ||||||||||||||||||||
Sbjct 681 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 729
>seq53127
Length=7988
Score = 89.7 bits (98), Expect = 3e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 34186 GTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTG 34245
||| |||||| ||| ||||| || || ||||| ||||| || | || ||||| ||
Sbjct 5801 GTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGTGTGCGCCCATCTTCCAATTG 5742
Query 34246 CTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTT 34305
||| || |||||||| || | || || || || | || |||||||| |||||
Sbjct 5741 CTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTCTTGAATCTT 5682
Query 34306 TTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGT 34365
| ||||| | | || | ||| | | ||| || |||| ||||||||||| || ||
Sbjct 5681 TGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGT 5622
Query 34366 GAGAGTTTTCACAAAGATCTGCAT 34389
| |||||| || ||||| |||||
Sbjct 5621 TAAAGTTTTTACGAAGATTTGCAT 5598
>seq207359
Length=487
Score = 84.2 bits (92), Expect = 1e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || | ||| |||||| |||||| || ||||||||||| ||||| ||| | ||
Sbjct 426 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCT 367
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| || |||||||| || ||||| || || || || || || | || || |||||
Sbjct 366 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCT 307
Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
|| ||| ||||| | || | || | || | | ||| || || | || || ||
Sbjct 306 TGGAT-TTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGT 248
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||| || ||||| ||||| |||||||| |||||
Sbjct 247 TTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322136409131840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |