Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_002730.1
Length=38297
Score E
Sequences producing significant alignments: (Bits) Value
seq237313 497 3e-136
seq237382 372 7e-99
seq237567 212 2e-50
>seq237313
Length=339
Score = 497 bits (550), Expect = 3e-136
Identities = 310/333 (93%), Gaps = 0/333 (0%)
Strand=Plus/Plus
Query 17234 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCGG 17293
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60
Query 17294 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGGGTCACCGCGATTATCTCCGCTCTGGT 17353
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120
Query 17354 TATCTGCATCATCGTTTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 17413
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180
Query 17414 CTACAAAGAGCAGCGCGACAAAAACACCAGAGAACTGAAGCTGGCGAACGCCACCATTAC 17473
|||||||| |||||||||||||| ||||||||||||||||||||||||| | |||||
Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240
Query 17474 TGACATGCAACAGCGCCAGCTTGATGCTGATGCACTCGATGCTAAATACACGAAGGAGTT 17533
||||||||| ||| |||| ||||| || ||| |||||||| |||||||||||||||||
Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300
Query 17534 AGCTGATGCGAAAGCTGAAAATGATGCTCTTCG 17566
||||||||| |||||||||||||||||||| ||
Sbjct 301 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCG 333
>seq237382
Length=259
Score = 372 bits (412), Expect = 7e-99
Identities = 221/231 (96%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 13113 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 13172
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60
Query 13173 ACAAGGTGATTGACCCAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGGGCTTTAACGT 13232
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120
Query 13233 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAATTCACGTGTGTGAGCACTGCTGCG 13292
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180
Query 13293 CAGAACTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAGACGATG 13343
|||||||||||||||||||||||||||| ||| ||||||||||||| ||||
Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATG 231
>seq237567
Length=272
Score = 212 bits (234), Expect = 2e-50
Identities = 179/215 (83%), Gaps = 14/215 (7%)
Strand=Plus/Plus
Query 16422 TTTGCTCATGAATG-CGGTCACGAACAAACCCG-TTACAAATCAACCGTAACCCGGATTT 16479
||||| | || || |||||||||||||| | | |||| || || | ||| || ||||||
Sbjct 62 TTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACA-CAGTAGCCTGGATTT 120
Query 16480 GTTC-------AAGCGACCATATCCATAATTCCTAATTTGAACAGATCCCCTTCT-GGGG 16531
|||| || ||||| ||| | ||||| || | || || |||||||| | ||||
Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATT---AAATAGAGCAAATCCCCTTATTGGGG 177
Query 16532 GTAAGACATGAAGATGCCAGaaaaaaaTGACCTGTTAGCCGCCATTCTCGCGGCAAAGGA 16591
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 178 GTAAGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGA 237
Query 16592 ACAAGGCATCGGGGCAATCCTTGCGTTTGCAATGG 16626
|||||||||||||||||||||||||||||||||||
Sbjct 238 ACAAGGCATCGGGGCAATCCTTGCGTTTGCAATGG 272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122083346787012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |