Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq237313 497 3e-136 seq237382 372 7e-99 seq237567 212 2e-50 >seq237313 Length=339 Score = 497 bits (550), Expect = 3e-136 Identities = 310/333 (93%), Gaps = 0/333 (0%) Strand=Plus/Plus Query 17234 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCGG 17293 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 17294 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGGGTCACCGCGATTATCTCCGCTCTGGT 17353 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 17354 TATCTGCATCATCGTTTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 17413 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 17414 CTACAAAGAGCAGCGCGACAAAAACACCAGAGAACTGAAGCTGGCGAACGCCACCATTAC 17473 |||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||| Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 17474 TGACATGCAACAGCGCCAGCTTGATGCTGATGCACTCGATGCTAAATACACGAAGGAGTT 17533 ||||||||| ||| |||| ||||| || ||| |||||||| ||||||||||||||||| Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 17534 AGCTGATGCGAAAGCTGAAAATGATGCTCTTCG 17566 ||||||||| |||||||||||||||||||| || Sbjct 301 AGCTGATGCTAAAGCTGAAAATGATGCTCTGCG 333 >seq237382 Length=259 Score = 372 bits (412), Expect = 7e-99 Identities = 221/231 (96%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 13113 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 13172 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 13173 ACAAGGTGATTGACCCAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGGGCTTTAACGT 13232 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 13233 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAATTCACGTGTGTGAGCACTGCTGCG 13292 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 13293 CAGAACTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAGACGATG 13343 |||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATG 231 >seq237567 Length=272 Score = 212 bits (234), Expect = 2e-50 Identities = 179/215 (83%), Gaps = 14/215 (7%) Strand=Plus/Plus Query 16422 TTTGCTCATGAATG-CGGTCACGAACAAACCCG-TTACAAATCAACCGTAACCCGGATTT 16479 ||||| | || || |||||||||||||| | | |||| || || | ||| || |||||| Sbjct 62 TTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACA-CAGTAGCCTGGATTT 120 Query 16480 GTTC-------AAGCGACCATATCCATAATTCCTAATTTGAACAGATCCCCTTCT-GGGG 16531 |||| || ||||| ||| | ||||| || | || || |||||||| | |||| Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATT---AAATAGAGCAAATCCCCTTATTGGGG 177 Query 16532 GTAAGACATGAAGATGCCAGaaaaaaaTGACCTGTTAGCCGCCATTCTCGCGGCAAAGGA 16591 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 178 GTAAGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGA 237 Query 16592 ACAAGGCATCGGGGCAATCCTTGCGTTTGCAATGG 16626 ||||||||||||||||||||||||||||||||||| Sbjct 238 ACAAGGCATCGGGGCAATCCTTGCGTTTGCAATGG 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122083346787012